Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH8P55286 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 TFAMP1-201ENST00000412727 736 ntBASIC17.75■□□□□ 0.43
CDH8P55286 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 AC211486.1-202ENST00000416371 468 ntBASIC17.75■□□□□ 0.43
CDH8P55286 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.75■□□□□ 0.43
CDH8P55286 AC211476.1-201ENST00000503899 468 ntBASIC17.75■□□□□ 0.43
CDH8P55286 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH8P55286 KRT8P48-201ENST00000515599 1220 ntBASIC17.75■□□□□ 0.43
CDH8P55286 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH8P55286 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH8P55286 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH8P55286 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH8P55286 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDH8P55286 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH8P55286 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CDH8P55286 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CDH8P55286 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH8P55286 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH8P55286 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 GPAA1P2-202ENST00000606848 1787 ntBASIC17.74■□□□□ 0.43
CDH8P55286 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 RPS8P6-201ENST00000426177 609 ntBASIC17.74■□□□□ 0.43
CDH8P55286 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 ACTG1P14-201ENST00000446382 1122 ntBASIC17.74■□□□□ 0.43
CDH8P55286 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH8P55286 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 RARRES2P8-201ENST00000566335 367 ntBASIC17.74■□□□□ 0.43
CDH8P55286 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CDH8P55286 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH8P55286 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH8P55286 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH8P55286 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
CDH8P55286 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 WASH6P-202ENST00000359512 1437 ntBASIC17.73■□□□□ 0.43
CDH8P55286 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH8P55286 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH8P55286 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CDH8P55286 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH8P55286 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH8P55286 TIMM8BP1-201ENST00000452384 211 ntBASIC17.73■□□□□ 0.43
CDH8P55286 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH8P55286 AC243562.1-201ENST00000560672 389 ntBASIC17.73■□□□□ 0.43
CDH8P55286 AL135744.1-201ENST00000565098 629 ntBASIC17.73■□□□□ 0.43
CDH8P55286 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH8P55286 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH8P55286 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDH8P55286 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH8P55286 AL691403.2-201ENST00000618460 490 ntBASIC17.73■□□□□ 0.43
CDH8P55286 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
CDH8P55286 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH8P55286 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms