Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
EPHA4P54764 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
EPHA4P54764 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.01■□□□□ 0.15
EPHA4P54764 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.01■□□□□ 0.15
EPHA4P54764 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.01■□□□□ 0.15
EPHA4P54764 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.01■□□□□ 0.15
EPHA4P54764 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.01■□□□□ 0.15
EPHA4P54764 AC140878.1-201ENST00000565277 250 ntBASIC16.01■□□□□ 0.15
EPHA4P54764 NIFKP4-201ENST00000567275 1192 ntBASIC16.01■□□□□ 0.15
EPHA4P54764 MIR3197-201ENST00000582241 73 ntBASIC16.01■□□□□ 0.15
EPHA4P54764 AL096865.1-201ENST00000606796 927 ntBASIC16.01■□□□□ 0.15
EPHA4P54764 MIR6080-201ENST00000617359 66 ntBASIC16.01■□□□□ 0.15
EPHA4P54764 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.01■□□□□ 0.15
EPHA4P54764 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
EPHA4P54764 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
EPHA4P54764 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
EPHA4P54764 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA4P54764 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16■□□□□ 0.15
EPHA4P54764 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16■□□□□ 0.15
EPHA4P54764 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16■□□□□ 0.15
EPHA4P54764 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 BAD-202ENST00000394531 631 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16■□□□□ 0.15
EPHA4P54764 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 RNA5SP421-201ENST00000516864 134 ntBASIC16■□□□□ 0.15
EPHA4P54764 BAD-207ENST00000544785 525 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 DUT-210ENST00000559935 569 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16■□□□□ 0.15
EPHA4P54764 AC005498.2-205ENST00000593218 784 ntBASIC16■□□□□ 0.15
EPHA4P54764 AC092364.2-202ENST00000597012 1073 ntBASIC16■□□□□ 0.15
EPHA4P54764 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16■□□□□ 0.15
EPHA4P54764 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 PCDHB17P-201ENST00000539533 2393 ntBASIC16■□□□□ 0.15
EPHA4P54764 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16■□□□□ 0.15
EPHA4P54764 SNX33P1-201ENST00000592116 1762 ntBASIC16■□□□□ 0.15
EPHA4P54764 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
EPHA4P54764 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
EPHA4P54764 AC008677.1-201ENST00000519230 1561 ntBASIC16■□□□□ 0.15
EPHA4P54764 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16■□□□□ 0.15
EPHA4P54764 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
EPHA4P54764 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EPHA4P54764 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.99■□□□□ 0.15
EPHA4P54764 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
EPHA4P54764 AL391256.1-201ENST00000443260 1855 ntBASIC15.99■□□□□ 0.15
EPHA4P54764 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EPHA4P54764 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
EPHA4P54764 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
EPHA4P54764 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EPHA4P54764 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
EPHA4P54764 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
EPHA4P54764 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EPHA4P54764 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms