Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNB3P54284 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNB3P54284 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.61■□□□□ 0.73
CACNB3P54284 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.61■□□□□ 0.73
CACNB3P54284 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.61■□□□□ 0.73
CACNB3P54284 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.61■□□□□ 0.73
CACNB3P54284 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNB3P54284 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CACNB3P54284 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNB3P54284 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.61■□□□□ 0.73
CACNB3P54284 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CACNB3P54284 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNB3P54284 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CACNB3P54284 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CACNB3P54284 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNB3P54284 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNB3P54284 AC060834.1-201ENST00000443027 2032 ntBASIC19.61■□□□□ 0.73
CACNB3P54284 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CACNB3P54284 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNB3P54284 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CACNB3P54284 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNB3P54284 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 AC138932.1-201ENST00000534164 6830 ntBASIC19.6■□□□□ 0.73
CACNB3P54284 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNB3P54284 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CACNB3P54284 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CACNB3P54284 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CACNB3P54284 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNB3P54284 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.6■□□□□ 0.73
CACNB3P54284 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNB3P54284 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNB3P54284 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNB3P54284 AL358472.5-202ENST00000641448 1267 ntBASIC19.6■□□□□ 0.73
CACNB3P54284 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CACNB3P54284 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CACNB3P54284 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNB3P54284 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CACNB3P54284 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CACNB3P54284 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNB3P54284 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.6■□□□□ 0.73
CACNB3P54284 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CACNB3P54284 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNB3P54284 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.59■□□□□ 0.73
CACNB3P54284 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNB3P54284 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.59■□□□□ 0.73
CACNB3P54284 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CACNB3P54284 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CACNB3P54284 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CACNB3P54284 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNB3P54284 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNB3P54284 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.58■□□□□ 0.73
CACNB3P54284 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNB3P54284 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CACNB3P54284 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CACNB3P54284 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CACNB3P54284 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNB3P54284 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms