Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCN2P51788 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
CLCN2P51788 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCN2P51788 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN2P51788 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN2P51788 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.21■□□□□ 0.18
CLCN2P51788 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN2P51788 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN2P51788 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CLCN2P51788 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN2P51788 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN2P51788 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN2P51788 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 AC148477.5-201ENST00000625164 1645 ntBASIC16.2■□□□□ 0.18
CLCN2P51788 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCN2P51788 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN2P51788 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN2P51788 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCN2P51788 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCN2P51788 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN2P51788 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCN2P51788 AC139887.3-201ENST00000568585 713 ntBASIC16.2■□□□□ 0.18
CLCN2P51788 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN2P51788 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLCN2P51788 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN2P51788 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLCN2P51788 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 AL590627.1-203ENST00000421194 1026 ntBASIC16.19■□□□□ 0.18
CLCN2P51788 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN2P51788 AC006557.2-201ENST00000592985 1240 ntBASIC16.19■□□□□ 0.18
CLCN2P51788 MIR7706-201ENST00000613747 67 ntBASIC16.19■□□□□ 0.18
CLCN2P51788 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN2P51788 BX640515.1-201ENST00000617215 977 ntBASIC16.19■□□□□ 0.18
CLCN2P51788 AL589182.2-201ENST00000619332 1049 ntBASIC16.19■□□□□ 0.18
CLCN2P51788 AC008735.5-201ENST00000623544 497 ntBASIC16.19■□□□□ 0.18
CLCN2P51788 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN2P51788 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN2P51788 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN2P51788 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN2P51788 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms