Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PDE6CP51160 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6CP51160 CICP6-201ENST00000457191 2729 ntBASIC18.04■□□□□ 0.48
PDE6CP51160 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PDE6CP51160 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDE6CP51160 YBX2P1-201ENST00000394192 760 ntBASIC18.04■□□□□ 0.48
PDE6CP51160 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6CP51160 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.04■□□□□ 0.48
PDE6CP51160 HLA-J-202ENST00000469281 1241 ntBASIC18.04■□□□□ 0.48
PDE6CP51160 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.04■□□□□ 0.48
PDE6CP51160 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6CP51160 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.04■□□□□ 0.48
PDE6CP51160 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6CP51160 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6CP51160 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDE6CP51160 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDE6CP51160 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PDE6CP51160 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.03■□□□□ 0.48
PDE6CP51160 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.03■□□□□ 0.48
PDE6CP51160 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.03■□□□□ 0.48
PDE6CP51160 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.03■□□□□ 0.48
PDE6CP51160 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
PDE6CP51160 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDE6CP51160 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDE6CP51160 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6CP51160 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6CP51160 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6CP51160 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
PDE6CP51160 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 GPX1P2-201ENST00000429271 606 ntBASIC18.02■□□□□ 0.48
PDE6CP51160 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6CP51160 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 SLC25A6P2-201ENST00000497974 877 ntBASIC18.02■□□□□ 0.48
PDE6CP51160 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.02■□□□□ 0.48
PDE6CP51160 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.02■□□□□ 0.48
PDE6CP51160 AC004790.2-201ENST00000623588 572 ntBASIC18.02■□□□□ 0.48
PDE6CP51160 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6CP51160 AC079781.4-201ENST00000641908 219 ntBASIC18.02■□□□□ 0.48
PDE6CP51160 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6CP51160 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6CP51160 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6CP51160 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6CP51160 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.02■□□□□ 0.47
PDE6CP51160 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6CP51160 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
PDE6CP51160 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6CP51160 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PDE6CP51160 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6CP51160 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.01■□□□□ 0.47
PDE6CP51160 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 AC006538.1-201ENST00000567905 1585 ntBASIC18.01■□□□□ 0.47
PDE6CP51160 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDE6CP51160 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6CP51160 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
PDE6CP51160 HCG4B-203ENST00000450128 991 ntBASIC18.01■□□□□ 0.47
PDE6CP51160 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.01■□□□□ 0.47
PDE6CP51160 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6CP51160 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms