Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.78■□□□□ 0.28
MDH1P40925 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.78■□□□□ 0.28
MDH1P40925 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
MDH1P40925 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.78■□□□□ 0.28
MDH1P40925 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.78■□□□□ 0.28
MDH1P40925 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MDH1P40925 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MDH1P40925 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
MDH1P40925 TMBIM7P-203ENST00000641617 1718 ntBASIC16.78■□□□□ 0.28
MDH1P40925 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.78■□□□□ 0.28
MDH1P40925 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MDH1P40925 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MDH1P40925 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
MDH1P40925 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.77■□□□□ 0.28
MDH1P40925 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MDH1P40925 AC007292.2-201ENST00000593524 1812 ntBASIC16.77■□□□□ 0.28
MDH1P40925 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.77■□□□□ 0.28
MDH1P40925 PKD1P5-201ENST00000532415 10291 ntBASIC16.77■□□□□ 0.28
MDH1P40925 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.77■□□□□ 0.28
MDH1P40925 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.77■□□□□ 0.28
MDH1P40925 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MDH1P40925 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MDH1P40925 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MDH1P40925 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MDH1P40925 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.77■□□□□ 0.28
MDH1P40925 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.77■□□□□ 0.28
MDH1P40925 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MDH1P40925 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.77■□□□□ 0.28
MDH1P40925 AP001412.1-201ENST00000608405 714 ntBASIC16.77■□□□□ 0.28
MDH1P40925 AL359258.3-201ENST00000622910 2331 ntBASIC16.77■□□□□ 0.28
MDH1P40925 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.77■□□□□ 0.28
MDH1P40925 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MDH1P40925 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
MDH1P40925 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MDH1P40925 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.77■□□□□ 0.27
MDH1P40925 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.77■□□□□ 0.27
MDH1P40925 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.77■□□□□ 0.27
MDH1P40925 AC005089.1-201ENST00000619486 2241 ntBASIC16.77■□□□□ 0.27
MDH1P40925 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.77■□□□□ 0.27
MDH1P40925 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MDH1P40925 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MDH1P40925 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.76■□□□□ 0.27
MDH1P40925 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.76■□□□□ 0.27
MDH1P40925 EGLN1P1-201ENST00000531623 762 ntBASIC16.76■□□□□ 0.27
MDH1P40925 AP003071.4-201ENST00000562276 1284 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms