Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6BP35913 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PDE6BP35913 AC135050.7-201ENST00000624508 2218 ntBASIC20.33■□□□□ 0.84
PDE6BP35913 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6BP35913 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 LETM1P2-201ENST00000597330 2178 ntBASIC20.32■□□□□ 0.84
PDE6BP35913 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.32■□□□□ 0.84
PDE6BP35913 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PDE6BP35913 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.32■□□□□ 0.84
PDE6BP35913 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.32■□□□□ 0.84
PDE6BP35913 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 RRP7BP-205ENST00000566851 833 ntBASIC20.32■□□□□ 0.84
PDE6BP35913 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.32■□□□□ 0.84
PDE6BP35913 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDE6BP35913 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDE6BP35913 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.32■□□□□ 0.84
PDE6BP35913 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6BP35913 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6BP35913 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDE6BP35913 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
PDE6BP35913 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6BP35913 AC106820.2-201ENST00000563775 3264 ntBASIC20.31■□□□□ 0.84
PDE6BP35913 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
PDE6BP35913 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6BP35913 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.31■□□□□ 0.84
PDE6BP35913 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.31■□□□□ 0.84
PDE6BP35913 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDE6BP35913 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PDE6BP35913 TMEM261P1-201ENST00000604899 340 ntBASIC20.31■□□□□ 0.84
PDE6BP35913 WFDC1-204ENST00000613603 549 ntBASIC20.31■□□□□ 0.84
PDE6BP35913 MIR6775-201ENST00000617557 69 ntBASIC20.31■□□□□ 0.84
PDE6BP35913 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6BP35913 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6BP35913 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.31■□□□□ 0.84
PDE6BP35913 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6BP35913 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PDE6BP35913 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6BP35913 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDE6BP35913 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6BP35913 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDE6BP35913 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 AC245100.3-201ENST00000441281 285 ntBASIC20.3■□□□□ 0.84
PDE6BP35913 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.3■□□□□ 0.84
PDE6BP35913 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 AC092337.1-201ENST00000568699 1129 ntBASIC20.3■□□□□ 0.84
PDE6BP35913 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.3■□□□□ 0.84
PDE6BP35913 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDE6BP35913 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDE6BP35913 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6BP35913 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms