Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.93■□□□□ 0.14
KRT20P35900 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
KRT20P35900 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.93■□□□□ 0.14
KRT20P35900 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
KRT20P35900 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
KRT20P35900 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
KRT20P35900 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT20P35900 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
KRT20P35900 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT20P35900 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
KRT20P35900 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 AL160237.2-201ENST00000556165 472 ntBASIC15.92■□□□□ 0.14
KRT20P35900 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT20P35900 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT20P35900 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT20P35900 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.92■□□□□ 0.14
KRT20P35900 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
KRT20P35900 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT20P35900 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT20P35900 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
KRT20P35900 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
KRT20P35900 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
KRT20P35900 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 RPS2P1-201ENST00000434010 821 ntBASIC15.91■□□□□ 0.14
KRT20P35900 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 AC093909.1-201ENST00000504731 1122 ntBASIC15.91■□□□□ 0.14
KRT20P35900 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT20P35900 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT20P35900 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.91■□□□□ 0.14
KRT20P35900 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 AC025062.2-201ENST00000605477 670 ntBASIC15.91■□□□□ 0.14
KRT20P35900 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 MIR1199-201ENST00000621445 119 ntBASIC15.91■□□□□ 0.14
KRT20P35900 TP73-AS1-207ENST00000624167 988 ntBASIC15.91■□□□□ 0.14
KRT20P35900 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT20P35900 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT20P35900 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms