Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA11P31270 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXA11P31270 AC004890.2-204ENST00000481968 304 ntBASIC17.88■□□□□ 0.45
HOXA11P31270 RNA5SP410-201ENST00000516285 106 ntBASIC17.88■□□□□ 0.45
HOXA11P31270 AC027369.6-201ENST00000525520 931 ntBASIC17.88■□□□□ 0.45
HOXA11P31270 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXA11P31270 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXA11P31270 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXA11P31270 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXA11P31270 AC073592.8-201ENST00000624126 511 ntBASIC17.88■□□□□ 0.45
HOXA11P31270 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA11P31270 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HOXA11P31270 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA11P31270 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 HLA-A-202ENST00000376806 1854 ntBASIC17.88■□□□□ 0.45
HOXA11P31270 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA11P31270 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA11P31270 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA11P31270 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 GGT3P-204ENST00000453783 1664 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.87■□□□□ 0.45
HOXA11P31270 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
HOXA11P31270 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HOXA11P31270 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HOXA11P31270 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 AL353705.2-201ENST00000428243 662 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 AC241585.1-201ENST00000433527 519 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.87■□□□□ 0.45
HOXA11P31270 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.87■□□□□ 0.45
HOXA11P31270 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 RN7SL204P-201ENST00000582831 262 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.87■□□□□ 0.45
HOXA11P31270 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXA11P31270 AL133215.2-201ENST00000609242 977 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 AL035456.1-201ENST00000456064 1369 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXA11P31270 AC100757.3-201ENST00000622361 1406 ntBASIC17.87■□□□□ 0.45
HOXA11P31270 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA11P31270 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA11P31270 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA11P31270 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXA11P31270 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA11P31270 UBALD1-205ENST00000590891 2641 ntBASIC17.86■□□□□ 0.45
HOXA11P31270 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms