Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMLP26374 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CHMLP26374 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CHMLP26374 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMLP26374 MIR3909-201ENST00000579518 119 ntBASIC20.06■□□□□ 0.8
CHMLP26374 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 AC020765.3-201ENST00000613051 740 ntBASIC20.06■□□□□ 0.8
CHMLP26374 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMLP26374 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMLP26374 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMLP26374 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMLP26374 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHMLP26374 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CHMLP26374 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.05■□□□□ 0.8
CHMLP26374 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 POU5F1P6-201ENST00000466990 990 ntBASIC20.05■□□□□ 0.8
CHMLP26374 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMLP26374 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMLP26374 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 AC064836.3-201ENST00000607928 673 ntBASIC20.05■□□□□ 0.8
CHMLP26374 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMLP26374 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMLP26374 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 REXO1L8P-201ENST00000604378 1897 ntBASIC20.05■□□□□ 0.8
CHMLP26374 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMLP26374 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMLP26374 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMLP26374 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHMLP26374 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 PMS2P4-201ENST00000412466 1052 ntBASIC20.04■□□□□ 0.8
CHMLP26374 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMLP26374 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 AC018845.2-201ENST00000568326 409 ntBASIC20.04■□□□□ 0.8
CHMLP26374 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMLP26374 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMLP26374 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMLP26374 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMLP26374 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CHMLP26374 AC006449.6-201ENST00000612330 2296 ntBASIC20.04■□□□□ 0.8
CHMLP26374 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMLP26374 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMLP26374 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms