Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
CXCL3P19876 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.02□□□□□ -0.16
CXCL3P19876 AC005912.2-201ENST00000619492 2400 ntBASIC14.02□□□□□ -0.16
CXCL3P19876 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.02□□□□□ -0.16
CXCL3P19876 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL3P19876 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL3P19876 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 LINC01101-201ENST00000622953 1884 ntBASIC14.02□□□□□ -0.16
CXCL3P19876 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CXCL3P19876 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL3P19876 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL3P19876 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCL3P19876 FAM197Y1-201ENST00000421178 764 ntBASIC14.02□□□□□ -0.17
CXCL3P19876 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.02□□□□□ -0.17
CXCL3P19876 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CXCL3P19876 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CXCL3P19876 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL3P19876 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CXCL3P19876 AL023803.3-201ENST00000615559 522 ntBASIC14.02□□□□□ -0.17
CXCL3P19876 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CXCL3P19876 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL3P19876 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CXCL3P19876 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.02□□□□□ -0.17
CXCL3P19876 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 AL391807.1-203ENST00000604392 2365 ntBASIC14.02□□□□□ -0.17
CXCL3P19876 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL3P19876 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL3P19876 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CXCL3P19876 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.02□□□□□ -0.17
CXCL3P19876 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 AC069224.1-201ENST00000566372 1715 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 TMBIM7P-203ENST00000641617 1718 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL3P19876 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
CXCL3P19876 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL3P19876 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCL3P19876 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCL3P19876 MIR3917-201ENST00000580971 93 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL3P19876 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL3P19876 CD177P1-201ENST00000606252 935 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 AC024243.1-201ENST00000609234 778 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL3P19876 ITM2C-210ENST00000620962 501 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 C8orf49-201ENST00000525043 1968 ntBASIC14.01□□□□□ -0.17
CXCL3P19876 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CXCL3P19876 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL3P19876 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL3P19876 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms