Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 RPS19-201ENST00000221975 500 ntTSL 3 BASIC23.81■■□□□ 1.4
CHGAP10645 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 HLA-V-201ENST00000429037 534 ntBASIC23.81■■□□□ 1.4
CHGAP10645 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 INE1-201ENST00000456273 945 ntBASIC23.81■■□□□ 1.4
CHGAP10645 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGAP10645 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGAP10645 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 RPS15-212ENST00000593052 629 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGAP10645 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CHGAP10645 IGHV3-72-202ENST00000621503 303 ntBASIC23.81■■□□□ 1.4
CHGAP10645 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGAP10645 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CHGAP10645 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGAP10645 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC23.8■■□□□ 1.4
CHGAP10645 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CHGAP10645 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC23.8■■□□□ 1.4
CHGAP10645 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CHGAP10645 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CHGAP10645 GPR53P-205ENST00000457298 1084 ntBASIC23.8■■□□□ 1.4
CHGAP10645 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.8■■□□□ 1.4
CHGAP10645 AL512361.1-201ENST00000554200 418 ntBASIC23.8■■□□□ 1.4
CHGAP10645 AC010336.2-201ENST00000564226 506 ntBASIC23.8■■□□□ 1.4
CHGAP10645 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.8■■□□□ 1.4
CHGAP10645 CHCHD2P3-201ENST00000603038 451 ntBASIC23.8■■□□□ 1.4
CHGAP10645 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CHGAP10645 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CHGAP10645 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 SNX33P1-201ENST00000592116 1762 ntBASIC23.8■■□□□ 1.4
CHGAP10645 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC23.8■■□□□ 1.4
CHGAP10645 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CHGAP10645 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGAP10645 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHGAP10645 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.79■■□□□ 1.4
CHGAP10645 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC23.79■■□□□ 1.4
CHGAP10645 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CHGAP10645 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC23.79■■□□□ 1.4
CHGAP10645 RHBDF1P1-201ENST00000427504 1941 ntBASIC23.79■■□□□ 1.4
CHGAP10645 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC23.79■■□□□ 1.4
CHGAP10645 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC23.79■■□□□ 1.4
CHGAP10645 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.79■■□□□ 1.4
CHGAP10645 RN7SL618P-201ENST00000477850 296 ntBASIC23.79■■□□□ 1.4
CHGAP10645 GIMAP3P-201ENST00000495150 836 ntBASIC23.79■■□□□ 1.4
CHGAP10645 SPDYE18-201ENST00000510091 1050 ntBASIC23.79■■□□□ 1.4
CHGAP10645 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHGAP10645 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC23.79■■□□□ 1.4
CHGAP10645 AC044860.1-202ENST00000559481 777 ntBASIC23.79■■□□□ 1.4
CHGAP10645 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC23.79■■□□□ 1.4
CHGAP10645 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGAP10645 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.79■■□□□ 1.4
CHGAP10645 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC23.78■■□□□ 1.4
CHGAP10645 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CHGAP10645 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC23.78■■□□□ 1.4
CHGAP10645 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGAP10645 KRT8P39-201ENST00000396270 1433 ntBASIC23.78■■□□□ 1.4
CHGAP10645 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGAP10645 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGAP10645 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CHGAP10645 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHGAP10645 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGAP10645 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.78■■□□□ 1.4
CHGAP10645 OSM-203ENST00000403463 464 ntTSL 3 BASIC23.78■■□□□ 1.4
CHGAP10645 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
CHGAP10645 AC124947.2-201ENST00000547118 1133 ntBASIC23.78■■□□□ 1.4
CHGAP10645 WASH4P-201ENST00000564273 1246 ntBASIC23.78■■□□□ 1.4
CHGAP10645 AC132938.2-201ENST00000579188 680 ntBASIC23.78■■□□□ 1.4
CHGAP10645 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC23.78■■□□□ 1.4
CHGAP10645 IFT20-216ENST00000588477 774 ntTSL 5 BASIC23.78■■□□□ 1.4
CHGAP10645 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms