Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 AC006449.5-201ENST00000610658 2098 ntBASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 AC063926.3-201ENST00000624734 5658 ntBASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV3-43DP0DP04 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
IGHV3-43DP0DP04 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.9□□□□□ -0.19
IGHV3-43DP0DP04 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
IGHV3-43DP0DP04 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.9□□□□□ -0.19
IGHV3-43DP0DP04 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 RPS15P9-201ENST00000494093 319 ntBASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 SLC25A6P2-201ENST00000497974 877 ntBASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 AL805961.1-202ENST00000641562 540 ntBASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV3-43DP0DP04 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 LINC02199-201ENST00000506655 2702 ntBASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AL121912.1-201ENST00000603683 238 ntBASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms