Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
HMGCRP04035 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCRP04035 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 AC114501.2-201ENST00000439631 535 ntBASIC18.66■□□□□ 0.58
HMGCRP04035 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCRP04035 AL512343.1-201ENST00000605837 169 ntBASIC18.66■□□□□ 0.58
HMGCRP04035 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCRP04035 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCRP04035 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCRP04035 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCRP04035 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 AC093525.9-201ENST00000624961 1746 ntBASIC18.66■□□□□ 0.58
HMGCRP04035 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMGCRP04035 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCRP04035 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCRP04035 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 AL138688.1-201ENST00000624851 1594 ntBASIC18.65■□□□□ 0.58
HMGCRP04035 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCRP04035 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCRP04035 SERBP1P3-201ENST00000459980 809 ntBASIC18.65■□□□□ 0.58
HMGCRP04035 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HMGCRP04035 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HMGCRP04035 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCRP04035 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 AL033527.4-201ENST00000641026 673 ntBASIC18.65■□□□□ 0.58
HMGCRP04035 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCRP04035 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HMGCRP04035 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
HMGCRP04035 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCRP04035 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCRP04035 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.58
HMGCRP04035 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
HMGCRP04035 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCRP04035 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCRP04035 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMGCRP04035 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCRP04035 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HMGCRP04035 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 SLC25A1P3-201ENST00000395415 828 ntBASIC18.64■□□□□ 0.57
HMGCRP04035 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCRP04035 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCRP04035 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCRP04035 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms