Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AC133539.2-201ENST00000604757 467 ntBASIC18.78■□□□□ 0.6
ALDH1A1P00352 AC079416.2-201ENST00000625035 1193 ntBASIC18.78■□□□□ 0.6
ALDH1A1P00352 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 FO393414.2-201ENST00000405153 598 ntBASIC18.77■□□□□ 0.6
ALDH1A1P00352 RPL7P3-201ENST00000441388 714 ntBASIC18.77■□□□□ 0.6
ALDH1A1P00352 RN7SL399P-201ENST00000471648 279 ntBASIC18.77■□□□□ 0.6
ALDH1A1P00352 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 MIR5189-201ENST00000577370 114 ntBASIC18.77■□□□□ 0.6
ALDH1A1P00352 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 AC025048.3-201ENST00000590609 569 ntBASIC18.77■□□□□ 0.6
ALDH1A1P00352 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
ALDH1A1P00352 AC005702.4-201ENST00000618393 416 ntBASIC18.77■□□□□ 0.6
ALDH1A1P00352 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ALDH1A1P00352 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ALDH1A1P00352 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ALDH1A1P00352 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ALDH1A1P00352 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ALDH1A1P00352 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ALDH1A1P00352 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ALDH1A1P00352 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 MIR3615-201ENST00000581999 87 ntBASIC18.76■□□□□ 0.59
ALDH1A1P00352 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 CU634019.7-201ENST00000624153 1185 ntBASIC18.76■□□□□ 0.59
ALDH1A1P00352 FP236241.2-201ENST00000624906 1185 ntBASIC18.76■□□□□ 0.59
ALDH1A1P00352 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 AL138781.2-201ENST00000617896 1843 ntBASIC18.76■□□□□ 0.59
ALDH1A1P00352 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ALDH1A1P00352 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ALDH1A1P00352 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 MIR1247-201ENST00000408206 136 ntBASIC18.75■□□□□ 0.59
ALDH1A1P00352 GPAA1P2-201ENST00000417923 928 ntBASIC18.75■□□□□ 0.59
ALDH1A1P00352 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 TDH-203ENST00000531764 1110 ntBASIC18.75■□□□□ 0.59
ALDH1A1P00352 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms