Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.78■□□□□ 0.28
VAPBO95292 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 CYP2A7P1-201ENST00000595391 815 ntBASIC16.78■□□□□ 0.28
VAPBO95292 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.78■□□□□ 0.28
VAPBO95292 FAM215A-202ENST00000632077 792 ntBASIC16.78■□□□□ 0.28
VAPBO95292 PGM5P2-202ENST00000637225 1043 ntBASIC16.78■□□□□ 0.28
VAPBO95292 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VAPBO95292 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
VAPBO95292 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VAPBO95292 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
VAPBO95292 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.77■□□□□ 0.28
VAPBO95292 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.77■□□□□ 0.28
VAPBO95292 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.77■□□□□ 0.28
VAPBO95292 FAAHP1-202ENST00000446499 1238 ntBASIC16.77■□□□□ 0.28
VAPBO95292 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.77■□□□□ 0.28
VAPBO95292 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.77■□□□□ 0.28
VAPBO95292 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.77■□□□□ 0.28
VAPBO95292 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.77■□□□□ 0.28
VAPBO95292 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAPBO95292 GGT3P-204ENST00000453783 1664 ntBASIC16.77■□□□□ 0.28
VAPBO95292 AL031731.1-201ENST00000642131 2094 ntBASIC16.77■□□□□ 0.27
VAPBO95292 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAPBO95292 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.77■□□□□ 0.27
VAPBO95292 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
VAPBO95292 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAPBO95292 AC026691.1-201ENST00000602502 2017 ntBASIC16.77■□□□□ 0.27
VAPBO95292 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VAPBO95292 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAPBO95292 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAPBO95292 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAPBO95292 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.77■□□□□ 0.27
VAPBO95292 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VAPBO95292 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VAPBO95292 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.76■□□□□ 0.27
VAPBO95292 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 AL391005.1-201ENST00000623953 2435 ntBASIC16.76■□□□□ 0.27
VAPBO95292 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.76■□□□□ 0.27
VAPBO95292 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.76■□□□□ 0.27
VAPBO95292 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 AC108073.2-201ENST00000464002 357 ntBASIC16.76■□□□□ 0.27
VAPBO95292 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.76■□□□□ 0.27
VAPBO95292 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VAPBO95292 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.76■□□□□ 0.27
VAPBO95292 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.76■□□□□ 0.27
VAPBO95292 AC087641.1-201ENST00000557561 1021 ntBASIC16.76■□□□□ 0.27
VAPBO95292 AC005412.3-201ENST00000580309 715 ntBASIC16.76■□□□□ 0.27
VAPBO95292 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 AC004790.2-201ENST00000623588 572 ntBASIC16.76■□□□□ 0.27
VAPBO95292 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms