Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KRT17P3-201ENST00000420566 1262 ntBASIC14.5□□□□□ -0.09
CCNKO75909 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CCNKO75909 AP003097.1-201ENST00000530657 1135 ntBASIC14.5□□□□□ -0.09
CCNKO75909 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.5□□□□□ -0.09
CCNKO75909 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 AL109923.1-201ENST00000618799 583 ntBASIC14.5□□□□□ -0.09
CCNKO75909 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCNKO75909 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CCNKO75909 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.5□□□□□ -0.09
CCNKO75909 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCNKO75909 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CCNKO75909 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.5□□□□□ -0.09
CCNKO75909 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCNKO75909 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
CCNKO75909 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCNKO75909 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 AC004817.3-201ENST00000602957 2129 ntBASIC14.5□□□□□ -0.09
CCNKO75909 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCNKO75909 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.5□□□□□ -0.09
CCNKO75909 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.49□□□□□ -0.09
CCNKO75909 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 AC041040.2-201ENST00000622926 2899 ntBASIC14.49□□□□□ -0.09
CCNKO75909 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 MIR935-201ENST00000401179 91 ntBASIC14.49□□□□□ -0.09
CCNKO75909 FAM207BP-201ENST00000447172 505 ntBASIC14.49□□□□□ -0.09
CCNKO75909 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.49□□□□□ -0.09
CCNKO75909 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.49□□□□□ -0.09
CCNKO75909 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.49□□□□□ -0.09
CCNKO75909 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCNKO75909 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 AL122018.1-201ENST00000446607 2310 ntBASIC14.48□□□□□ -0.09
CCNKO75909 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
CCNKO75909 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 AC036111.1-201ENST00000533973 1582 ntBASIC14.48□□□□□ -0.09
CCNKO75909 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.48□□□□□ -0.09
CCNKO75909 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CCNKO75909 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
CCNKO75909 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.48□□□□□ -0.09
CCNKO75909 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.48□□□□□ -0.09
CCNKO75909 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCNKO75909 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms