Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AC140113.2-201ENST00000604370 208 ntBASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AL031055.1-201ENST00000606362 631 ntBASIC14.85□□□□□ -0.03
TRAF3IP2O43734 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF3IP2O43734 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 PCDHB19P-201ENST00000570871 2371 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 GPAA1P2-202ENST00000606848 1787 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 MED15P5-201ENST00000423150 992 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AL591424.1-201ENST00000442569 1213 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 MIR3909-201ENST00000579518 119 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AC027601.4-201ENST00000611259 610 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AC004877.2-201ENST00000623941 599 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 AC007064.4-201ENST00000637740 555 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 BCAR1-209ENST00000546196 1340 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 ME2P1-201ENST00000426028 1970 ntBASIC14.84□□□□□ -0.03
TRAF3IP2O43734 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF3IP2O43734 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms