Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 MIR1202-201ENST00000408529 83 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 AC134915.1-201ENST00000426461 574 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.7■□□□□ 0.42
TNRC18O15417 HIST3H2BA-201ENST00000436555 524 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.7■□□□□ 0.42
TNRC18O15417 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.7■□□□□ 0.42
TNRC18O15417 AC138951.2-201ENST00000623455 1161 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TNRC18O15417 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 ACTBP7-201ENST00000418351 1124 ntBASIC17.69■□□□□ 0.42
TNRC18O15417 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.69■□□□□ 0.42
TNRC18O15417 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.69■□□□□ 0.42
TNRC18O15417 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.69■□□□□ 0.42
TNRC18O15417 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TNRC18O15417 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
TNRC18O15417 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TNRC18O15417 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 AL157792.1-201ENST00000488281 530 ntBASIC17.69■□□□□ 0.42
TNRC18O15417 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNRC18O15417 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.69■□□□□ 0.42
TNRC18O15417 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.68■□□□□ 0.42
TNRC18O15417 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNRC18O15417 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.68■□□□□ 0.42
TNRC18O15417 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.68■□□□□ 0.42
TNRC18O15417 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.68■□□□□ 0.42
TNRC18O15417 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNRC18O15417 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.68■□□□□ 0.42
TNRC18O15417 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.68■□□□□ 0.42
TNRC18O15417 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TNRC18O15417 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.68■□□□□ 0.42
TNRC18O15417 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TNRC18O15417 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.68■□□□□ 0.42
TNRC18O15417 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.68■□□□□ 0.42
TNRC18O15417 AC233280.19-201ENST00000633223 136 ntBASIC17.68■□□□□ 0.42
TNRC18O15417 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.68■□□□□ 0.42
TNRC18O15417 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TNRC18O15417 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNRC18O15417 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNRC18O15417 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNRC18O15417 AC026316.1-201ENST00000398900 414 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 BRI3P1-201ENST00000440440 378 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 AC078819.1-201ENST00000547454 765 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 AC012085.1-201ENST00000548270 765 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.67■□□□□ 0.42
TNRC18O15417 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.67■□□□□ 0.42
TNRC18O15417 AC025279.2-201ENST00000569730 653 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.67■□□□□ 0.42
TNRC18O15417 BX539320.1-201ENST00000623759 877 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNRC18O15417 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.67■□□□□ 0.42
TNRC18O15417 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.67■□□□□ 0.42
TNRC18O15417 C2orf27AP3-201ENST00000434123 579 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 AC012362.1-201ENST00000434906 739 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 HSPB1P2-201ENST00000448722 546 ntBASIC17.67■□□□□ 0.42
TNRC18O15417 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNRC18O15417 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms