Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 GPAA1P2-202ENST00000606848 1787 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 LINC00982-205ENST00000420957 435 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AL020989.1-201ENST00000422979 469 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AC246785.2-201ENST00000432512 513 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AC112907.2-201ENST00000448639 330 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AC139887.4-201ENST00000607877 719 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV3S1A0A5B6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AC020658.6-201ENST00000623564 1870 ntBASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AC136621.1-201ENST00000624017 2304 ntBASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 MIR4497-201ENST00000583208 89 ntBASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 AC145285.6-201ENST00000604632 637 ntBASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV3S1A0A5B6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms