Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 EGFEM1P-202ENST00000431685 1563 ntBASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.95■□□□□ 0.46
SSX2IPQ9Y2D8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 TNRC18P3-201ENST00000441896 2691 ntBASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 FAM58DP-201ENST00000428076 619 ntBASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 KLF2P3-201ENST00000451977 1087 ntBASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 LINC01225-203ENST00000563550 1244 ntBASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 MIR4745-201ENST00000577608 62 ntBASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSX2IPQ9Y2D8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AL035633.1-201ENST00000406139 838 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AC055876.3-201ENST00000431496 288 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 INGX-202ENST00000489074 768 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AC093214.1-201ENST00000511688 1107 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 DUX4L27-201ENST00000554796 1261 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AL031055.1-201ENST00000606362 631 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AC138649.4-201ENST00000612222 287 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AL645608.8-201ENST00000606034 2086 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 AL355312.1-201ENST00000407115 2176 ntBASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SSX2IPQ9Y2D8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms