Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 AL033527.5-202ENST00000641632 1098 ntBASIC23.75■■□□□ 1.39
STAG3Q9UJ98 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
STAG3Q9UJ98 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 MEP1AP4-201ENST00000423244 1087 ntBASIC23.74■■□□□ 1.39
STAG3Q9UJ98 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC23.74■■□□□ 1.39
STAG3Q9UJ98 AC004461.2-201ENST00000629517 803 ntBASIC23.74■■□□□ 1.39
STAG3Q9UJ98 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
STAG3Q9UJ98 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 COMP-202ENST00000425807 2292 ntTSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 AC234783.1-201ENST00000441761 496 ntBASIC23.73■■□□□ 1.39
STAG3Q9UJ98 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 AC123567.1-201ENST00000548294 1261 ntBASIC23.73■■□□□ 1.39
STAG3Q9UJ98 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 CTBP2P3-201ENST00000585629 1255 ntBASIC23.73■■□□□ 1.39
STAG3Q9UJ98 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 TUBB8P12-201ENST00000308911 1335 ntBASIC23.73■■□□□ 1.39
STAG3Q9UJ98 TUBB7P-202ENST00000428444 1305 ntBASIC23.73■■□□□ 1.39
STAG3Q9UJ98 TUBB8P7-204ENST00000567960 1332 ntBASIC23.73■■□□□ 1.39
STAG3Q9UJ98 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
STAG3Q9UJ98 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 RPL28-204ENST00000431533 590 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AC245100.3-201ENST00000441281 285 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 ELK1P1-201ENST00000485699 580 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 SDHAP3-202ENST00000515467 728 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AC023310.3-201ENST00000557027 670 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 RPL28-206ENST00000558752 671 ntTSL 3 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AC100756.1-201ENST00000562736 682 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AC138749.3-201ENST00000567691 622 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AC116165.1-201ENST00000611806 668 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AC006277.1-201ENST00000624348 1610 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AL354751.1-201ENST00000412768 1863 ntBASIC23.72■■□□□ 1.39
STAG3Q9UJ98 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
STAG3Q9UJ98 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms