Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 AC132008.2-207ENST00000454517 770 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 AL445228.2-201ENST00000605589 952 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 AP001269.4-201ENST00000609611 512 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 AL590787.1-201ENST00000568856 1315 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 MTHFR-217ENST00000641820 1569 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.17■□□□□ 0.66
USP25Q9UHP3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 AC138894.3-201ENST00000603787 634 ntBASIC19.17■□□□□ 0.66
USP25Q9UHP3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP25Q9UHP3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP25Q9UHP3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 LINC00895-201ENST00000629028 1637 ntBASIC19.16■□□□□ 0.66
USP25Q9UHP3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 AL139288.1-201ENST00000623748 933 ntBASIC19.16■□□□□ 0.66
USP25Q9UHP3 AL022326.1-202ENST00000641533 845 ntBASIC19.16■□□□□ 0.66
USP25Q9UHP3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 NCF1C-201ENST00000438382 1427 ntBASIC19.16■□□□□ 0.66
USP25Q9UHP3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP25Q9UHP3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
USP25Q9UHP3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 TERC-201ENST00000602385 541 ntBASIC19.15■□□□□ 0.66
USP25Q9UHP3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.15■□□□□ 0.66
USP25Q9UHP3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP25Q9UHP3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms