Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 KRT18P13-201ENST00000400056 1290 ntBASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 MIR3687-2-201ENST00000577708 61 ntBASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 MIR3687-1-201ENST00000614492 61 ntBASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 HMGA1P7-201ENST00000406908 502 ntBASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRDM9Q9NQV7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 UPF3AP3-201ENST00000420996 769 ntBASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 HNRNPA1P23-201ENST00000491091 1133 ntBASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 C20orf181-201ENST00000623918 480 ntBASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRDM9Q9NQV7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 FLJ38576-201ENST00000623820 2459 ntBASIC15.77■□□□□ 0.11
PRDM9Q9NQV7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms