Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 AC005052.1-201ENST00000625181 2492 ntBASIC15.96■□□□□ 0.15
BRF2Q9HAW0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
BRF2Q9HAW0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 AL662844.1-201ENST00000546340 181 ntBASIC15.95■□□□□ 0.14
BRF2Q9HAW0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 MIR3909-201ENST00000579518 119 ntBASIC15.95■□□□□ 0.14
BRF2Q9HAW0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.95■□□□□ 0.14
BRF2Q9HAW0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
BRF2Q9HAW0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 AC018695.7-201ENST00000624587 2492 ntBASIC15.94■□□□□ 0.14
BRF2Q9HAW0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 AC098831.1-202ENST00000438821 336 ntBASIC15.94■□□□□ 0.14
BRF2Q9HAW0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 RNA5SP419-201ENST00000515908 135 ntBASIC15.94■□□□□ 0.14
BRF2Q9HAW0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 MIR4751-201ENST00000578027 74 ntBASIC15.94■□□□□ 0.14
BRF2Q9HAW0 AL049840.3-201ENST00000602669 611 ntBASIC15.94■□□□□ 0.14
BRF2Q9HAW0 AL645728.2-201ENST00000641974 660 ntBASIC15.94■□□□□ 0.14
BRF2Q9HAW0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BRF2Q9HAW0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms