Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 AC109635.5-201ENST00000533593 962 ntBASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 AC040169.1-201ENST00000565382 521 ntBASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMEM60Q9H2L4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 PMS2P7-201ENST00000506558 1336 ntBASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 PMS2P4-201ENST00000412466 1052 ntBASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 AC099522.2-201ENST00000607001 744 ntBASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TMEM60Q9H2L4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 AC006449.5-201ENST00000610658 2098 ntBASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM60Q9H2L4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 MCCD1P2-201ENST00000423228 335 ntBASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 AC004832.2-201ENST00000426397 482 ntBASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 AC021097.1-201ENST00000607902 574 ntBASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 PCGF3-213ENST00000620529 1899 ntBASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM60Q9H2L4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms