Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 AF254983.2-201ENST00000612331 135 ntBASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.56■□□□□ 0.24
COL25A1Q9BXS0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC025279.2-201ENST00000569730 653 ntBASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL25A1Q9BXS0 AC007375.3-201ENST00000600936 2314 ntBASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 C1QBPP1-201ENST00000400117 770 ntBASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 AC138466.4-201ENST00000623965 852 ntBASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL25A1Q9BXS0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL25A1Q9BXS0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms