Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 PCDH8P1-201ENST00000428983 2773 ntBASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 HLA-A-202ENST00000376806 1854 ntBASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 LINC00895-201ENST00000629028 1637 ntBASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 AL161645.1-201ENST00000622716 1255 ntBASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.19■□□□□ 0.82
RPAP1Q9BWH6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AL592309.1-201ENST00000443127 649 ntBASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 MPDU1-223ENST00000582151 728 ntBASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AJ011932.1-201ENST00000621707 465 ntBASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPAP1Q9BWH6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 HMGA1P7-201ENST00000406908 502 ntBASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AC005237.2-201ENST00000434368 219 ntBASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 MIR4492-201ENST00000581627 80 ntBASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AL009183.1-201ENST00000603760 355 ntBASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AC013467.2-201ENST00000605472 835 ntBASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RPAP1Q9BWH6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms