Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.02■□□□□ -0
PHF3Q92576 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 GPS2P2-201ENST00000430745 888 ntBASIC15.02■□□□□ -0
PHF3Q92576 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.02■□□□□ -0
PHF3Q92576 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PHF3Q92576 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.02■□□□□ -0
PHF3Q92576 AL161645.1-201ENST00000622716 1255 ntBASIC15.02■□□□□ -0
PHF3Q92576 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.02■□□□□ -0
PHF3Q92576 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.02■□□□□ -0
PHF3Q92576 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.02■□□□□ -0
PHF3Q92576 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.02■□□□□ -0
PHF3Q92576 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF3Q92576 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PHF3Q92576 PCDH8P1-201ENST00000428983 2773 ntBASIC15.02□□□□□ -0.01
PHF3Q92576 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.02□□□□□ -0.01
PHF3Q92576 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.02□□□□□ -0.01
PHF3Q92576 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.02□□□□□ -0.01
PHF3Q92576 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 BCRP1-201ENST00000444246 691 ntBASIC15.02□□□□□ -0.01
PHF3Q92576 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.02□□□□□ -0.01
PHF3Q92576 AC025678.2-201ENST00000562061 970 ntBASIC15.02□□□□□ -0.01
PHF3Q92576 AC140878.1-201ENST00000565277 250 ntBASIC15.02□□□□□ -0.01
PHF3Q92576 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PHF3Q92576 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF3Q92576 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PHF3Q92576 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.02□□□□□ -0.01
PHF3Q92576 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.01□□□□□ -0.01
PHF3Q92576 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.01□□□□□ -0.01
PHF3Q92576 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.01□□□□□ -0.01
PHF3Q92576 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 AL031055.1-201ENST00000606362 631 ntBASIC15.01□□□□□ -0.01
PHF3Q92576 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 AC012569.1-201ENST00000591191 1524 ntBASIC15.01□□□□□ -0.01
PHF3Q92576 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PHF3Q92576 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.01□□□□□ -0.01
PHF3Q92576 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF3Q92576 AL353732.1-201ENST00000569618 1459 ntBASIC15.01□□□□□ -0.01
PHF3Q92576 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15□□□□□ -0.01
PHF3Q92576 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15□□□□□ -0.01
PHF3Q92576 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15□□□□□ -0.01
PHF3Q92576 HCG4-201ENST00000418983 998 ntBASIC15□□□□□ -0.01
PHF3Q92576 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15□□□□□ -0.01
PHF3Q92576 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15□□□□□ -0.01
PHF3Q92576 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PHF3Q92576 RN7SL589P-201ENST00000481268 310 ntBASIC15□□□□□ -0.01
PHF3Q92576 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PHF3Q92576 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PHF3Q92576 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15□□□□□ -0.01
PHF3Q92576 AC090340.1-201ENST00000620778 4980 ntBASIC15□□□□□ -0.01
PHF3Q92576 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 HLA-A-202ENST00000376806 1854 ntBASIC15□□□□□ -0.01
PHF3Q92576 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PHF3Q92576 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15□□□□□ -0.01
PHF3Q92576 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms