Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 CXCL1P1-201ENST00000502804 216 ntBASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 AC096734.2-201ENST00000562054 433 ntBASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 CYP2A7P1-201ENST00000595391 815 ntBASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 AL353732.1-201ENST00000569618 1459 ntBASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCC2Q8TAQ2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCC2Q8TAQ2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCC2Q8TAQ2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SMARCC2Q8TAQ2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SMARCC2Q8TAQ2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCC2Q8TAQ2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 MTHFR-217ENST00000641820 1569 ntBASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 AC129492.6-201ENST00000611383 1305 ntBASIC19.51■□□□□ 0.71
SMARCC2Q8TAQ2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 YBX2P1-201ENST00000394192 760 ntBASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 AC004832.2-201ENST00000426397 482 ntBASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCC2Q8TAQ2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms