Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 ALOX12P2-203ENST00000570921 1945 ntBASIC25.8■■□□□ 1.72
VPS8Q8N3P4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 AL080243.2-201ENST00000418783 582 ntBASIC25.79■■□□□ 1.72
VPS8Q8N3P4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 AL133215.2-201ENST00000609242 977 ntBASIC25.79■■□□□ 1.72
VPS8Q8N3P4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 AC020763.4-201ENST00000623414 4170 ntBASIC25.79■■□□□ 1.72
VPS8Q8N3P4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS8Q8N3P4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.78■■□□□ 1.72
VPS8Q8N3P4 TREML5P-201ENST00000421694 576 ntBASIC25.78■■□□□ 1.72
VPS8Q8N3P4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
VPS8Q8N3P4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
VPS8Q8N3P4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 AL592424.1-201ENST00000563624 1536 ntBASIC25.76■■□□□ 1.71
VPS8Q8N3P4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 FO538757.1-201ENST00000623083 1397 ntBASIC25.76■■□□□ 1.71
VPS8Q8N3P4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms