Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 SOCS2P1-201ENST00000417727 557 ntBASIC20.67■□□□□ 0.9
R3HDM1Q15032 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 AC023310.1-201ENST00000554836 735 ntBASIC20.67■□□□□ 0.9
R3HDM1Q15032 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 AC061975.2-201ENST00000581722 295 ntBASIC20.67■□□□□ 0.9
R3HDM1Q15032 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.67■□□□□ 0.9
R3HDM1Q15032 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 LINC01451-201ENST00000623792 534 ntBASIC20.67■□□□□ 0.9
R3HDM1Q15032 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 KRT8P49-201ENST00000604166 1432 ntBASIC20.67■□□□□ 0.9
R3HDM1Q15032 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM1Q15032 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
R3HDM1Q15032 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC245884.6-201ENST00000515672 1067 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 MIR4741-201ENST00000579822 90 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC104982.3-201ENST00000581995 514 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 EEF1DP1-201ENST00000585891 896 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC091812.3-201ENST00000621362 345 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 AL158212.4-201ENST00000624062 1286 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 AC134312.5-201ENST00000568031 1313 ntBASIC20.66■□□□□ 0.9
R3HDM1Q15032 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.66■□□□□ 0.9
R3HDM1Q15032 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM1Q15032 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.65■□□□□ 0.9
R3HDM1Q15032 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.65■□□□□ 0.9
R3HDM1Q15032 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 RN7SL818P-201ENST00000485099 259 ntBASIC20.65■□□□□ 0.9
R3HDM1Q15032 RN7SL720P-201ENST00000488178 304 ntBASIC20.65■□□□□ 0.9
R3HDM1Q15032 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 BRI3BPP1-201ENST00000594224 787 ntBASIC20.65■□□□□ 0.9
R3HDM1Q15032 RN7SL725P-201ENST00000606439 259 ntBASIC20.65■□□□□ 0.9
R3HDM1Q15032 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.65■□□□□ 0.9
R3HDM1Q15032 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM1Q15032 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms