Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCN2P51788 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 AC124947.2-201ENST00000547118 1133 ntBASIC16.23■□□□□ 0.19
CLCN2P51788 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN2P51788 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN2P51788 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLCN2P51788 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLCN2P51788 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN2P51788 AC009336.1-201ENST00000608941 1553 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN2P51788 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLCN2P51788 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN2P51788 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN2P51788 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN2P51788 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN2P51788 LAGE3P1-201ENST00000425356 484 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 HNRNPDP1-201ENST00000439535 754 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLCN2P51788 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 RNA5SP419-201ENST00000515908 135 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLCN2P51788 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.22■□□□□ 0.19
CLCN2P51788 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CLCN2P51788 FAM215A-202ENST00000632077 792 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 AC004817.3-201ENST00000602957 2129 ntBASIC16.22■□□□□ 0.19
CLCN2P51788 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CLCN2P51788 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLCN2P51788 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN2P51788 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN2P51788 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN2P51788 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 AC006538.1-201ENST00000567905 1585 ntBASIC16.21■□□□□ 0.19
CLCN2P51788 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLCN2P51788 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 PAUPAR-201ENST00000630360 2965 ntBASIC16.21■□□□□ 0.19
CLCN2P51788 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLCN2P51788 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN2P51788 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCN2P51788 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCN2P51788 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCN2P51788 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCN2P51788 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN2P51788 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
CLCN2P51788 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.21■□□□□ 0.19
CLCN2P51788 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCN2P51788 AC107918.4-202ENST00000641623 219 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms