Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 MIR1909-201ENST00000411312 80 ntBASIC14.44□□□□□ -0.1
HCFC1P51610 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.44□□□□□ -0.1
HCFC1P51610 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.44□□□□□ -0.1
HCFC1P51610 ZNF890P-202ENST00000530367 1156 ntBASIC14.44□□□□□ -0.1
HCFC1P51610 AC104794.3-201ENST00000566840 1248 ntBASIC14.44□□□□□ -0.1
HCFC1P51610 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.44□□□□□ -0.1
HCFC1P51610 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.44□□□□□ -0.1
HCFC1P51610 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.44□□□□□ -0.1
HCFC1P51610 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 AC073439.1-201ENST00000624121 1774 ntBASIC14.44□□□□□ -0.1
HCFC1P51610 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
HCFC1P51610 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
HCFC1P51610 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
HCFC1P51610 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HCFC1P51610 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.44□□□□□ -0.1
HCFC1P51610 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HCFC1P51610 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.44□□□□□ -0.1
HCFC1P51610 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.44□□□□□ -0.1
HCFC1P51610 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 AP001350.2-201ENST00000625104 1094 ntBASIC14.44□□□□□ -0.1
HCFC1P51610 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HCFC1P51610 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCFC1P51610 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HCFC1P51610 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.43□□□□□ -0.1
HCFC1P51610 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.43□□□□□ -0.1
HCFC1P51610 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.43□□□□□ -0.1
HCFC1P51610 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.43□□□□□ -0.1
HCFC1P51610 AC021097.1-201ENST00000607902 574 ntBASIC14.43□□□□□ -0.1
HCFC1P51610 SPTSSB-204ENST00000617024 1292 ntBASIC14.43□□□□□ -0.1
HCFC1P51610 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HCFC1P51610 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.43□□□□□ -0.1
HCFC1P51610 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HCFC1P51610 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 TOP3BP1-201ENST00000420768 1380 ntBASIC14.43□□□□□ -0.1
HCFC1P51610 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HCFC1P51610 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HCFC1P51610 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.42□□□□□ -0.1
HCFC1P51610 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HCFC1P51610 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.42□□□□□ -0.1
HCFC1P51610 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.42□□□□□ -0.1
HCFC1P51610 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.42□□□□□ -0.1
HCFC1P51610 AL512361.1-201ENST00000554200 418 ntBASIC14.42□□□□□ -0.1
HCFC1P51610 RN7SL828P-201ENST00000607615 303 ntBASIC14.42□□□□□ -0.1
HCFC1P51610 AC017083.2-201ENST00000608069 979 ntBASIC14.42□□□□□ -0.1
HCFC1P51610 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 AP001094.4-201ENST00000579008 2176 ntBASIC14.42□□□□□ -0.1
HCFC1P51610 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HCFC1P51610 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HCFC1P51610 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HCFC1P51610 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HCFC1P51610 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms