Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC21.47■■□□□ 1.03
RXRBP28702 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC21.47■■□□□ 1.03
RXRBP28702 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RXRBP28702 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RXRBP28702 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RXRBP28702 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RXRBP28702 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRBP28702 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RXRBP28702 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
RXRBP28702 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RXRBP28702 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.47■■□□□ 1.03
RXRBP28702 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.47■■□□□ 1.03
RXRBP28702 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 MTX1P1-201ENST00000440904 838 ntBASIC21.46■■□□□ 1.03
RXRBP28702 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.46■■□□□ 1.03
RXRBP28702 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 MIR3907-201ENST00000579424 151 ntBASIC21.46■■□□□ 1.03
RXRBP28702 RN7SL555P-201ENST00000584742 339 ntBASIC21.46■■□□□ 1.03
RXRBP28702 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RXRBP28702 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.46■■□□□ 1.03
RXRBP28702 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRBP28702 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RXRBP28702 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRBP28702 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC21.45■■□□□ 1.02
RXRBP28702 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 FO393414.2-201ENST00000405153 598 ntBASIC21.45■■□□□ 1.02
RXRBP28702 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRBP28702 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRBP28702 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.45■■□□□ 1.02
RXRBP28702 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.45■■□□□ 1.02
RXRBP28702 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.45■■□□□ 1.02
RXRBP28702 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.45■■□□□ 1.02
RXRBP28702 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.45■■□□□ 1.02
RXRBP28702 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRBP28702 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRBP28702 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RXRBP28702 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RXRBP28702 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRBP28702 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.44■■□□□ 1.02
RXRBP28702 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.44■■□□□ 1.02
RXRBP28702 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RXRBP28702 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.44■■□□□ 1.02
RXRBP28702 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 CYP46A4P-201ENST00000414953 267 ntBASIC21.44■■□□□ 1.02
RXRBP28702 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 AC093433.1-201ENST00000458048 571 ntBASIC21.44■■□□□ 1.02
RXRBP28702 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RXRBP28702 AC134698.3-201ENST00000523880 214 ntBASIC21.44■■□□□ 1.02
RXRBP28702 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
RXRBP28702 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 AC006480.2-201ENST00000609770 1337 ntBASIC21.44■■□□□ 1.02
RXRBP28702 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RXRBP28702 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RXRBP28702 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRBP28702 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms