Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFSF4P23510 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 AC023274.1-201ENST00000418278 595 ntBASIC14.3□□□□□ -0.12
TNFSF4P23510 BX842568.4-201ENST00000421222 227 ntBASIC14.3□□□□□ -0.12
TNFSF4P23510 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 AC074386.1-202ENST00000463561 864 ntBASIC14.3□□□□□ -0.12
TNFSF4P23510 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TNFSF4P23510 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFSF4P23510 PDPK2P-202ENST00000562415 1191 ntBASIC14.3□□□□□ -0.12
TNFSF4P23510 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.3□□□□□ -0.12
TNFSF4P23510 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TNFSF4P23510 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.3□□□□□ -0.12
TNFSF4P23510 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
TNFSF4P23510 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 AC060834.1-201ENST00000443027 2032 ntBASIC14.29□□□□□ -0.12
TNFSF4P23510 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 AC008894.3-201ENST00000624324 3103 ntBASIC14.29□□□□□ -0.12
TNFSF4P23510 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 AC004832.2-201ENST00000426397 482 ntBASIC14.29□□□□□ -0.12
TNFSF4P23510 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFSF4P23510 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFSF4P23510 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFSF4P23510 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.29□□□□□ -0.12
TNFSF4P23510 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 AL671883.3-201ENST00000603274 991 ntBASIC14.29□□□□□ -0.12
TNFSF4P23510 AC068137.2-201ENST00000605408 478 ntBASIC14.29□□□□□ -0.12
TNFSF4P23510 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFSF4P23510 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFSF4P23510 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFSF4P23510 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 MST1L-201ENST00000442552 2185 ntBASIC14.29□□□□□ -0.12
TNFSF4P23510 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFSF4P23510 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFSF4P23510 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFSF4P23510 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms