Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP1P11387 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.59■□□□□ 0.73
TOP1P11387 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TOP1P11387 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP1P11387 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.59■□□□□ 0.73
TOP1P11387 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TOP1P11387 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TOP1P11387 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.59■□□□□ 0.73
TOP1P11387 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
TOP1P11387 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TOP1P11387 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.58■□□□□ 0.73
TOP1P11387 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TOP1P11387 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.58■□□□□ 0.73
TOP1P11387 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TOP1P11387 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TOP1P11387 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TOP1P11387 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.58■□□□□ 0.72
TOP1P11387 AP000344.2-201ENST00000512987 629 ntBASIC19.58■□□□□ 0.72
TOP1P11387 AP002490.2-201ENST00000524791 560 ntBASIC19.58■□□□□ 0.72
TOP1P11387 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TOP1P11387 RARRES2P8-201ENST00000566335 367 ntBASIC19.58■□□□□ 0.72
TOP1P11387 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TOP1P11387 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TOP1P11387 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.58■□□□□ 0.72
TOP1P11387 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.58■□□□□ 0.72
TOP1P11387 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.58■□□□□ 0.72
TOP1P11387 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP1P11387 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TOP1P11387 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.57■□□□□ 0.72
TOP1P11387 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 AKAP8P1-201ENST00000434743 1349 ntBASIC19.57■□□□□ 0.72
TOP1P11387 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TOP1P11387 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP1P11387 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.57■□□□□ 0.72
TOP1P11387 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TOP1P11387 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
TOP1P11387 AC022145.2-201ENST00000598203 171 ntBASIC19.57■□□□□ 0.72
TOP1P11387 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.57■□□□□ 0.72
TOP1P11387 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 AC026120.1-201ENST00000611536 926 ntBASIC19.57■□□□□ 0.72
TOP1P11387 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TOP1P11387 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TOP1P11387 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TOP1P11387 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP1P11387 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TOP1P11387 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP1P11387 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TOP1P11387 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP1P11387 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TOP1P11387 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TOP1P11387 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.56■□□□□ 0.72
TOP1P11387 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TOP1P11387 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP1P11387 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TOP1P11387 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TOP1P11387 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms