Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 KRT8P9-201ENST00000558927 1449 ntBASIC12.51□□□□□ -0.41
SMIM17P0DL12 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 HLA-F-220ENST00000434407 884 ntBASIC12.5□□□□□ -0.41
SMIM17P0DL12 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.5□□□□□ -0.41
SMIM17P0DL12 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 COX11P1-201ENST00000489116 835 ntBASIC12.5□□□□□ -0.41
SMIM17P0DL12 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 MIR4497-201ENST00000583208 89 ntBASIC12.5□□□□□ -0.41
SMIM17P0DL12 AC079602.3-201ENST00000623931 403 ntBASIC12.5□□□□□ -0.41
SMIM17P0DL12 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 AC078925.2-201ENST00000624013 1973 ntBASIC12.5□□□□□ -0.41
SMIM17P0DL12 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM17P0DL12 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM17P0DL12 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 MIR193BHG-211ENST00000641433 5365 ntBASIC12.49□□□□□ -0.41
SMIM17P0DL12 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 EGFEM1P-202ENST00000431685 1563 ntBASIC12.49□□□□□ -0.41
SMIM17P0DL12 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
SMIM17P0DL12 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM17P0DL12 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms