Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
COL4A1P02462 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.12■□□□□ 0.81
COL4A1P02462 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.12■□□□□ 0.81
COL4A1P02462 RPSAP52-203ENST00000622976 1023 ntBASIC20.12■□□□□ 0.81
COL4A1P02462 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.12■□□□□ 0.81
COL4A1P02462 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
COL4A1P02462 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A1P02462 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A1P02462 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A1P02462 AC138969.3-201ENST00000546612 1459 ntBASIC20.11■□□□□ 0.81
COL4A1P02462 AC138932.2-201ENST00000548268 1459 ntBASIC20.11■□□□□ 0.81
COL4A1P02462 AC126755.4-201ENST00000549796 1459 ntBASIC20.11■□□□□ 0.81
COL4A1P02462 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL4A1P02462 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.11■□□□□ 0.81
COL4A1P02462 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A1P02462 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 HIST3H2BA-201ENST00000436555 524 ntBASIC20.11■□□□□ 0.81
COL4A1P02462 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL4A1P02462 INE1-201ENST00000456273 945 ntBASIC20.11■□□□□ 0.81
COL4A1P02462 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A1P02462 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.11■□□□□ 0.81
COL4A1P02462 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A1P02462 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A1P02462 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
COL4A1P02462 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.11■□□□□ 0.81
COL4A1P02462 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.11■□□□□ 0.81
COL4A1P02462 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A1P02462 PCDHB18P-201ENST00000524813 2368 ntBASIC20.11■□□□□ 0.81
COL4A1P02462 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 SPDYE17-201ENST00000412399 783 ntBASIC20.1■□□□□ 0.81
COL4A1P02462 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.1■□□□□ 0.81
COL4A1P02462 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.1■□□□□ 0.81
COL4A1P02462 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.1■□□□□ 0.81
COL4A1P02462 BTBD7P1-201ENST00000447253 1453 ntBASIC20.1■□□□□ 0.81
COL4A1P02462 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.1■□□□□ 0.81
COL4A1P02462 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.1■□□□□ 0.81
COL4A1P02462 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.1■□□□□ 0.81
COL4A1P02462 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 GIMAP3P-201ENST00000495150 836 ntBASIC20.1■□□□□ 0.81
COL4A1P02462 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COL4A1P02462 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.1■□□□□ 0.81
COL4A1P02462 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.1■□□□□ 0.81
COL4A1P02462 SRD5A3P1-201ENST00000603021 949 ntBASIC20.1■□□□□ 0.81
COL4A1P02462 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
COL4A1P02462 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.1■□□□□ 0.81
COL4A1P02462 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A1P02462 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL4A1P02462 AC005332.8-201ENST00000622750 2735 ntBASIC20.09■□□□□ 0.81
COL4A1P02462 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
COL4A1P02462 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A1P02462 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A1P02462 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.09■□□□□ 0.81
COL4A1P02462 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
COL4A1P02462 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL4A1P02462 ARSEP1-201ENST00000420443 635 ntBASIC20.09■□□□□ 0.81
COL4A1P02462 DFFBP1-201ENST00000433250 979 ntBASIC20.09■□□□□ 0.81
COL4A1P02462 RN7SL837P-201ENST00000463010 287 ntBASIC20.09■□□□□ 0.81
COL4A1P02462 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.09■□□□□ 0.81
COL4A1P02462 AC119751.2-201ENST00000504529 210 ntBASIC20.09■□□□□ 0.81
COL4A1P02462 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.09■□□□□ 0.81
COL4A1P02462 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A1P02462 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.09■□□□□ 0.81
COL4A1P02462 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A1P02462 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A1P02462 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL4A1P02462 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL4A1P02462 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A1P02462 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A1P02462 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms