Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RPSAP52-203ENST00000622976 1023 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 KRT8P22-201ENST00000562317 1415 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 GOLGA2P4-201ENST00000441462 777 ntBASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC108725.1-201ENST00000495472 409 ntBASIC18.8■□□□□ 0.6
ALDH1A1P00352 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALDH1A1P00352 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ALDH1A1P00352 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AL589702.1-201ENST00000641229 1509 ntBASIC18.79■□□□□ 0.6
ALDH1A1P00352 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AL442647.2-201ENST00000429864 857 ntBASIC18.79■□□□□ 0.6
ALDH1A1P00352 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AC093724.1-201ENST00000448659 1027 ntBASIC18.79■□□□□ 0.6
ALDH1A1P00352 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALDH1A1P00352 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
ALDH1A1P00352 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AC006277.1-201ENST00000624348 1610 ntBASIC18.78■□□□□ 0.6
ALDH1A1P00352 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 KRT8P39-201ENST00000396270 1433 ntBASIC18.78■□□□□ 0.6
ALDH1A1P00352 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.78■□□□□ 0.6
ALDH1A1P00352 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms