Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 AC020916.1-201ENST00000587762 1774 ntBASIC14.98□□□□□ -0.01
ZIC3O60481 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.98□□□□□ -0.01
ZIC3O60481 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ZIC3O60481 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.98□□□□□ -0.01
ZIC3O60481 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZIC3O60481 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 AC069335.1-201ENST00000489972 472 ntBASIC14.98□□□□□ -0.01
ZIC3O60481 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
ZIC3O60481 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.98□□□□□ -0.01
ZIC3O60481 AC027307.2-201ENST00000591252 911 ntBASIC14.98□□□□□ -0.01
ZIC3O60481 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.98□□□□□ -0.01
ZIC3O60481 AC027612.4-201ENST00000605371 583 ntBASIC14.98□□□□□ -0.01
ZIC3O60481 AC008267.7-201ENST00000624570 1194 ntBASIC14.98□□□□□ -0.01
ZIC3O60481 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ZIC3O60481 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC3O60481 AC011676.5-201ENST00000624864 2660 ntBASIC14.98□□□□□ -0.01
ZIC3O60481 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC3O60481 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZIC3O60481 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.97□□□□□ -0.01
ZIC3O60481 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.97□□□□□ -0.01
ZIC3O60481 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ZIC3O60481 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
ZIC3O60481 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.97□□□□□ -0.01
ZIC3O60481 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.97□□□□□ -0.01
ZIC3O60481 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
ZIC3O60481 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZIC3O60481 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ZIC3O60481 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.97□□□□□ -0.01
ZIC3O60481 AL627223.1-201ENST00000416693 442 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 AC005237.2-201ENST00000434368 219 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.97□□□□□ -0.01
ZIC3O60481 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.97□□□□□ -0.01
ZIC3O60481 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.97□□□□□ -0.01
ZIC3O60481 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.97□□□□□ -0.01
ZIC3O60481 KRT8P23-201ENST00000560090 1207 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.97□□□□□ -0.01
ZIC3O60481 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.97□□□□□ -0.01
ZIC3O60481 AC020765.3-201ENST00000613051 740 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 AC084121.4-201ENST00000641598 221 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 AF228730.8-201ENST00000642140 221 ntBASIC14.97□□□□□ -0.01
ZIC3O60481 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC3O60481 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
ZIC3O60481 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC3O60481 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
ZIC3O60481 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC3O60481 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms