Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.66■□□□□ 0.26
PHGDHO43175 PI4KAP1-204ENST00000612579 1703 ntBASIC16.66■□□□□ 0.26
PHGDHO43175 REXO1L6P-202ENST00000619970 1078 ntBASIC16.66■□□□□ 0.26
PHGDHO43175 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.66■□□□□ 0.26
PHGDHO43175 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PHGDHO43175 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHGDHO43175 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHGDHO43175 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
PHGDHO43175 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHGDHO43175 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PHGDHO43175 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.66■□□□□ 0.26
PHGDHO43175 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHGDHO43175 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PHGDHO43175 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHGDHO43175 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PHGDHO43175 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHGDHO43175 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.65■□□□□ 0.26
PHGDHO43175 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PHGDHO43175 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PHGDHO43175 AC006504.4-201ENST00000592118 1568 ntBASIC16.65■□□□□ 0.26
PHGDHO43175 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.65■□□□□ 0.26
PHGDHO43175 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.65■□□□□ 0.26
PHGDHO43175 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PHGDHO43175 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.65■□□□□ 0.26
PHGDHO43175 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.65■□□□□ 0.26
PHGDHO43175 MPDU1-223ENST00000582151 728 ntBASIC16.65■□□□□ 0.26
PHGDHO43175 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.65■□□□□ 0.26
PHGDHO43175 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
PHGDHO43175 AC025062.2-201ENST00000605477 670 ntBASIC16.65■□□□□ 0.26
PHGDHO43175 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.65■□□□□ 0.26
PHGDHO43175 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHGDHO43175 GGT3P-204ENST00000453783 1664 ntBASIC16.65■□□□□ 0.26
PHGDHO43175 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.65■□□□□ 0.26
PHGDHO43175 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PHGDHO43175 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.65■□□□□ 0.26
PHGDHO43175 PAUPAR-201ENST00000630360 2965 ntBASIC16.65■□□□□ 0.26
PHGDHO43175 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.65■□□□□ 0.26
PHGDHO43175 AL512652.2-201ENST00000625156 1716 ntBASIC16.65■□□□□ 0.26
PHGDHO43175 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PHGDHO43175 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PHGDHO43175 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.64■□□□□ 0.26
PHGDHO43175 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.64■□□□□ 0.25
PHGDHO43175 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.64■□□□□ 0.25
PHGDHO43175 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PHGDHO43175 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.64■□□□□ 0.25
PHGDHO43175 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.64■□□□□ 0.25
PHGDHO43175 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 AC021087.4-201ENST00000563761 564 ntBASIC16.64■□□□□ 0.25
PHGDHO43175 REXO1L3P-201ENST00000622202 1288 ntBASIC16.64■□□□□ 0.25
PHGDHO43175 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 AC012313.10-201ENST00000623509 926 ntBASIC16.64■□□□□ 0.25
PHGDHO43175 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.64■□□□□ 0.25
PHGDHO43175 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PHGDHO43175 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.64■□□□□ 0.25
PHGDHO43175 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHGDHO43175 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.64■□□□□ 0.25
PHGDHO43175 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PHGDHO43175 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms