Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC18.24■□□□□ 0.51
PITPNM1O00562 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC18.24■□□□□ 0.51
PITPNM1O00562 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC18.24■□□□□ 0.51
PITPNM1O00562 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.24■□□□□ 0.51
PITPNM1O00562 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AC090330.1-201ENST00000588646 764 ntBASIC18.24■□□□□ 0.51
PITPNM1O00562 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.24■□□□□ 0.51
PITPNM1O00562 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PITPNM1O00562 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.24■□□□□ 0.51
PITPNM1O00562 AC093536.2-201ENST00000565257 1406 ntBASIC18.23■□□□□ 0.51
PITPNM1O00562 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PITPNM1O00562 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC18.23■□□□□ 0.51
PITPNM1O00562 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC18.23■□□□□ 0.51
PITPNM1O00562 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.23■□□□□ 0.51
PITPNM1O00562 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.23■□□□□ 0.51
PITPNM1O00562 AL844908.2-201ENST00000609461 460 ntBASIC18.23■□□□□ 0.51
PITPNM1O00562 AC008738.7-201ENST00000609744 511 ntBASIC18.23■□□□□ 0.51
PITPNM1O00562 AC092574.1-201ENST00000609771 420 ntBASIC18.23■□□□□ 0.51
PITPNM1O00562 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.23■□□□□ 0.51
PITPNM1O00562 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.23■□□□□ 0.51
PITPNM1O00562 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.23■□□□□ 0.51
PITPNM1O00562 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PITPNM1O00562 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.23■□□□□ 0.51
PITPNM1O00562 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
PITPNM1O00562 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PITPNM1O00562 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.23■□□□□ 0.51
PITPNM1O00562 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.22■□□□□ 0.51
PITPNM1O00562 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.22■□□□□ 0.51
PITPNM1O00562 MTND5P31-201ENST00000419366 1374 ntBASIC18.22■□□□□ 0.51
PITPNM1O00562 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PITPNM1O00562 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PITPNM1O00562 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.22■□□□□ 0.51
PITPNM1O00562 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.22■□□□□ 0.51
PITPNM1O00562 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PITPNM1O00562 AL353779.1-201ENST00000434793 351 ntBASIC18.22■□□□□ 0.51
PITPNM1O00562 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.22■□□□□ 0.51
PITPNM1O00562 AC063944.3-201ENST00000609969 533 ntBASIC18.22■□□□□ 0.51
PITPNM1O00562 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.22■□□□□ 0.51
PITPNM1O00562 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.22■□□□□ 0.51
PITPNM1O00562 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
PITPNM1O00562 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PITPNM1O00562 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PITPNM1O00562 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.22■□□□□ 0.51
PITPNM1O00562 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms