Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 MT-TF-201ENST00000387314 71 ntBASIC0.57□□□□□ -2.321e-323■□□□□ 8.2
NIP7Q9Y221 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.099e-8■□□□□ 8.2
NIP7Q9Y221 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.26■□□□□ 0.999e-8■□□□□ 8.2
NIP7Q9Y221 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.889e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.759e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.08■□□□□ 0.489e-8■□□□□ 8.2
NIP7Q9Y221 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.94■□□□□ 0.469e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-206ENST00000429895 6312 ntTSL 1 (best)17.59■□□□□ 0.419e-8■□□□□ 8.2
NIP7Q9Y221 RPN2-203ENST00000373632 1073 ntTSL 517.23■□□□□ 0.359e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-215ENST00000496447 5887 ntTSL 1 (best)15.2■□□□□ 0.029e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-212ENST00000477970 3321 ntTSL 214.29□□□□□ -0.129e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-205ENST00000414879 4836 ntTSL 213.98□□□□□ -0.179e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-204ENST00000412568 4154 ntTSL 513.22□□□□□ -0.299e-8■□□□□ 8.2
NIP7Q9Y221 PTPRF-203ENST00000372407 4600 ntTSL 212.93□□□□□ -0.349e-8■□□□□ 8.2
NIP7Q9Y221 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC10.62□□□□□ -0.719e-8■□□□□ 8.2
NIP7Q9Y221 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.769e-8■□□□□ 8.2
NIP7Q9Y221 RPN2-205ENST00000456102 791 ntTSL 39.17□□□□□ -0.949e-8■□□□□ 8.2
NIP7Q9Y221 SNORD27-201ENST00000363981 72 ntBASIC0.82□□□□□ -2.281e-323■□□□□ 8.1
NIP7Q9Y221 SERPINA1-211ENST00000553327 581 ntTSL 314.94□□□□□ -0.024e-66■□□□□ 8
Retrieved 19 of 1,619 protein–RNA pairs in 5.4 ms