Protein–RNA interactions for Protein: Q9UGI6

KCNN3, Small conductance calcium-activated potassium channel protein 3, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN3Q9UGI6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNN3Q9UGI6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNN3Q9UGI6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNN3Q9UGI6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNN3Q9UGI6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNN3Q9UGI6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNN3Q9UGI6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KCNN3Q9UGI6 AC019069.1-201ENST00000610008 1333 ntBASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
KCNN3Q9UGI6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 AC103834.1-201ENST00000520383 144 ntBASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNN3Q9UGI6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 MIR4508-201ENST00000584178 70 ntBASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 AC131212.1-201ENST00000613771 668 ntBASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNN3Q9UGI6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNN3Q9UGI6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KCNN3Q9UGI6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNN3Q9UGI6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNN3Q9UGI6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNN3Q9UGI6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 GUSBP5-201ENST00000418136 578 ntBASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNN3Q9UGI6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNN3Q9UGI6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KCNN3Q9UGI6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.48■■□□□ 1.03
KCNN3Q9UGI6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNN3Q9UGI6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNN3Q9UGI6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNN3Q9UGI6 PVT1_1.1-201ENST00000615125 194 ntBASIC21.48■■□□□ 1.03
KCNN3Q9UGI6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 THA1P-201ENST00000590384 1145 ntBASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNN3Q9UGI6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNN3Q9UGI6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms