Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CPNE4Q96A23 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.44■■□□□ 1.02
CPNE4Q96A23 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE4Q96A23 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE4Q96A23 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE4Q96A23 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CPNE4Q96A23 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE4Q96A23 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE4Q96A23 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE4Q96A23 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.43■■□□□ 1.02
CPNE4Q96A23 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE4Q96A23 ERN1-208ENST00000606895 2068 ntBASIC21.43■■□□□ 1.02
CPNE4Q96A23 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE4Q96A23 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.42■■□□□ 1.02
CPNE4Q96A23 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.42■■□□□ 1.02
CPNE4Q96A23 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE4Q96A23 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CPNE4Q96A23 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.41■■□□□ 1.02
CPNE4Q96A23 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE4Q96A23 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE4Q96A23 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE4Q96A23 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.4■■□□□ 1.02
CPNE4Q96A23 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE4Q96A23 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.4■■□□□ 1.02
CPNE4Q96A23 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPNE4Q96A23 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE4Q96A23 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE4Q96A23 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE4Q96A23 AC091060.1-201ENST00000623524 1766 ntBASIC21.38■■□□□ 1.01
CPNE4Q96A23 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE4Q96A23 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE4Q96A23 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE4Q96A23 DUSP8P4-201ENST00000399538 1761 ntBASIC21.38■■□□□ 1.01
CPNE4Q96A23 AC145676.1-201ENST00000514988 2004 ntBASIC21.38■■□□□ 1.01
CPNE4Q96A23 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CPNE4Q96A23 AC096887.2-201ENST00000623443 1957 ntBASIC21.37■■□□□ 1.01
CPNE4Q96A23 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.37■■□□□ 1.01
CPNE4Q96A23 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE4Q96A23 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE4Q96A23 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.37■■□□□ 1.01
CPNE4Q96A23 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CPNE4Q96A23 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CPNE4Q96A23 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.37■■□□□ 1.01
CPNE4Q96A23 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE4Q96A23 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE4Q96A23 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE4Q96A23 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE4Q96A23 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CPNE4Q96A23 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE4Q96A23 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE4Q96A23 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.36■■□□□ 1.01
CPNE4Q96A23 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE4Q96A23 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE4Q96A23 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE4Q96A23 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE4Q96A23 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE4Q96A23 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE4Q96A23 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE4Q96A23 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.35■■□□□ 1.01
CPNE4Q96A23 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE4Q96A23 AC019171.1-201ENST00000601251 1056 ntBASIC21.35■■□□□ 1.01
CPNE4Q96A23 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE4Q96A23 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.35■■□□□ 1.01
CPNE4Q96A23 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CPNE4Q96A23 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CPNE4Q96A23 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE4Q96A23 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE4Q96A23 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE4Q96A23 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE4Q96A23 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE4Q96A23 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE4Q96A23 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE4Q96A23 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE4Q96A23 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE4Q96A23 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CPNE4Q96A23 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CPNE4Q96A23 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE4Q96A23 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
CPNE4Q96A23 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE4Q96A23 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.33■■□□□ 1.01
CPNE4Q96A23 LONRF2P2-201ENST00000439212 571 ntBASIC21.33■■□□□ 1.01
CPNE4Q96A23 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.33■■□□□ 1.01
CPNE4Q96A23 AC010980.1-201ENST00000587192 1142 ntBASIC21.33■■□□□ 1.01
CPNE4Q96A23 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE4Q96A23 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE4Q96A23 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE4Q96A23 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE4Q96A23 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CPNE4Q96A23 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE4Q96A23 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.32■■□□□ 1
CPNE4Q96A23 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE4Q96A23 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.32■■□□□ 1
CPNE4Q96A23 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE4Q96A23 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.32■■□□□ 1
CPNE4Q96A23 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE4Q96A23 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE4Q96A23 AC097639.1-201ENST00000565519 1891 ntBASIC21.32■■□□□ 1
CPNE4Q96A23 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.32■■□□□ 1
CPNE4Q96A23 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CPNE4Q96A23 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms