Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 tR(ACG)DtR(ACG)D 73 nt6.4□□□□□ -1.38
VTI1Q04338 tR(ACG)EtR(ACG)E 73 nt6.4□□□□□ -1.38
VTI1Q04338 tR(ACG)KtR(ACG)K 73 nt6.4□□□□□ -1.38
VTI1Q04338 tR(ACG)LtR(ACG)L 73 nt6.4□□□□□ -1.38
VTI1Q04338 tR(ACG)OtR(ACG)O 73 nt6.4□□□□□ -1.38
VTI1Q04338 TSA1YML028W 591 nt6.4□□□□□ -1.38
VTI1Q04338 MRPS12YNR036C 462 nt6.4□□□□□ -1.38
VTI1Q04338 YBR124WYBR124W 360 nt6.4□□□□□ -1.38
VTI1Q04338 TAE1YBR261C 699 nt6.4□□□□□ -1.38
VTI1Q04338 AAP1YHR047C 2571 nt6.4□□□□□ -1.39
VTI1Q04338 CLB2YPR119W 1476 nt6.4□□□□□ -1.39
VTI1Q04338 ACS1YAL054C 2142 nt6.4□□□□□ -1.39
VTI1Q04338 CCZ1YBR131W 2115 nt6.4□□□□□ -1.39
VTI1Q04338 FRS2YFL022C 1512 nt6.4□□□□□ -1.39
VTI1Q04338 RPN11YFR004W 921 nt6.39□□□□□ -1.39
VTI1Q04338 RPL7AYGL076C 735 nt6.39□□□□□ -1.39
VTI1Q04338 YKL153WYKL153W 510 nt6.39□□□□□ -1.39
VTI1Q04338 RPL7BYPL198W 735 nt6.39□□□□□ -1.39
VTI1Q04338 PYC1YGL062W 3537 nt6.39□□□□□ -1.39
VTI1Q04338 XBP1YIL101C 1944 nt6.38□□□□□ -1.39
VTI1Q04338 MTC5YDR128W 3447 nt6.38□□□□□ -1.39
VTI1Q04338 SKN1YGR143W 2316 nt6.38□□□□□ -1.39
VTI1Q04338 SUP2tY(GUA)D 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP11tY(GUA)F1 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP6tY(GUA)F2 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP7tY(GUA)J1 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP4tY(GUA)J2 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP5tY(GUA)M1 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP8tY(GUA)M2 75 nt6.38□□□□□ -1.39
VTI1Q04338 SUP3tY(GUA)O 75 nt6.38□□□□□ -1.39
VTI1Q04338 TIF2YJL138C 1188 nt6.38□□□□□ -1.39
VTI1Q04338 TIF1YKR059W 1188 nt6.38□□□□□ -1.39
VTI1Q04338 YLR361C-AYLR361C-A 297 nt6.38□□□□□ -1.39
VTI1Q04338 NHP6BYBR089C-A 300 nt6.38□□□□□ -1.39
VTI1Q04338 RBA50YDR527W 1320 nt6.38□□□□□ -1.39
VTI1Q04338 CRF1YDR223W 1404 nt6.38□□□□□ -1.39
VTI1Q04338 GAT1YFL021W 1533 nt6.38□□□□□ -1.39
VTI1Q04338 HAS1YMR290C 1518 nt6.38□□□□□ -1.39
VTI1Q04338 TAH18YPR048W 1872 nt6.38□□□□□ -1.39
VTI1Q04338 ARO10YDR380W 1908 nt6.38□□□□□ -1.39
VTI1Q04338 MCM3YEL032W 2916 nt6.38□□□□□ -1.39
VTI1Q04338 PKC1YBL105C 3456 nt6.37□□□□□ -1.39
VTI1Q04338 MDM31YHR194W 1740 nt6.37□□□□□ -1.39
VTI1Q04338 YPR196WYPR196W 1413 nt6.37□□□□□ -1.39
VTI1Q04338 CDC34YDR054C 888 nt6.37□□□□□ -1.39
VTI1Q04338 LDS1YAL018C 978 nt6.37□□□□□ -1.39
VTI1Q04338 SEC17YBL050W 879 nt6.37□□□□□ -1.39
VTI1Q04338 YHM2YMR241W 945 nt6.37□□□□□ -1.39
VTI1Q04338 ARP1YHR129C 1155 nt6.36□□□□□ -1.39
VTI1Q04338 MPM1YJL066C 759 nt6.36□□□□□ -1.39
VTI1Q04338 VPS24YKL041W 675 nt6.36□□□□□ -1.39
VTI1Q04338 YKR073CYKR073C 321 nt6.36□□□□□ -1.39
VTI1Q04338 RPL10YLR075W 666 nt6.36□□□□□ -1.39
VTI1Q04338 YNL108CYNL108C 813 nt6.36□□□□□ -1.39
VTI1Q04338 YPR114WYPR114W 948 nt6.36□□□□□ -1.39
VTI1Q04338 CRZ1YNL027W 2037 nt6.36□□□□□ -1.39
VTI1Q04338 YDR396WYDR396W 501 nt6.35□□□□□ -1.39
VTI1Q04338 YEL068CYEL068C 333 nt6.35□□□□□ -1.39
VTI1Q04338 YHR218W-AYHR218W-A 318 nt6.35□□□□□ -1.39
VTI1Q04338 JJJ3YJR097W 519 nt6.35□□□□□ -1.39
VTI1Q04338 PSR2YLR019W 1194 nt6.35□□□□□ -1.39
VTI1Q04338 YNR040WYNR040W 771 nt6.35□□□□□ -1.39
VTI1Q04338 YBL112CYBL112C 318 nt6.35□□□□□ -1.39
VTI1Q04338 YLL067CYLL067C 3618 nt6.35□□□□□ -1.39
VTI1Q04338 YJU3YKL094W 942 nt6.34□□□□□ -1.39
VTI1Q04338 MRP51YPL118W 1035 nt6.34□□□□□ -1.39
VTI1Q04338 RAD3YER171W 2337 nt6.34□□□□□ -1.39
VTI1Q04338 KEX2YNL238W 2445 nt6.34□□□□□ -1.4
VTI1Q04338 CLB1YGR108W 1416 nt6.33□□□□□ -1.4
VTI1Q04338 YDR387CYDR387C 1668 nt6.33□□□□□ -1.4
VTI1Q04338 KTR5YNL029C 1569 nt6.33□□□□□ -1.4
VTI1Q04338 YET3YDL072C 612 nt6.33□□□□□ -1.4
VTI1Q04338 YMR252CYMR252C 405 nt6.33□□□□□ -1.4
VTI1Q04338 MRPS16YPL013C 366 nt6.33□□□□□ -1.4
VTI1Q04338 PPR1YLR014C 2715 nt6.33□□□□□ -1.4
VTI1Q04338 IES1YFL013C 2079 nt6.32□□□□□ -1.4
VTI1Q04338 MKC7YDR144C 1791 nt6.32□□□□□ -1.4
VTI1Q04338 TAL1YLR354C 1008 nt6.32□□□□□ -1.4
VTI1Q04338 ATG4YNL223W 1485 nt6.32□□□□□ -1.4
VTI1Q04338 ENP1YBR247C 1452 nt6.32□□□□□ -1.4
VTI1Q04338 GPB2YAL056W 2643 nt6.31□□□□□ -1.4
VTI1Q04338 VHT1YGR065C 1782 nt6.31□□□□□ -1.4
VTI1Q04338 PDR18YNR070W 4002 nt6.31□□□□□ -1.4
VTI1Q04338 SSK22YCR073C 3996 nt6.31□□□□□ -1.4
VTI1Q04338 MAK31YCR020C-A 267 nt6.31□□□□□ -1.4
VTI1Q04338 APN1YKL114C 1104 nt6.31□□□□□ -1.4
VTI1Q04338 OST3YOR085W 1053 nt6.31□□□□□ -1.4
VTI1Q04338 OSW2YLR054C 2175 nt6.31□□□□□ -1.4
VTI1Q04338 YDR034W-BYDR034W-B 156 nt6.3□□□□□ -1.4
VTI1Q04338 PHB1YGR132C 864 nt6.3□□□□□ -1.4
VTI1Q04338 RPR2YIR015W 435 nt6.3□□□□□ -1.4
VTI1Q04338 HAP3YBL021C 435 nt6.3□□□□□ -1.4
VTI1Q04338 AIM17YHL021C 1398 nt6.3□□□□□ -1.4
VTI1Q04338 PTK2YJR059W 2457 nt6.3□□□□□ -1.4
VTI1Q04338 KDX1YKL161C 1302 nt6.29□□□□□ -1.4
VTI1Q04338 MET7YOR241W 1647 nt6.29□□□□□ -1.4
VTI1Q04338 AMA1YGR225W 1782 nt6.29□□□□□ -1.4
VTI1Q04338 COX20YDR231C 618 nt6.29□□□□□ -1.4
VTI1Q04338 AIM20YIL158W 615 nt6.29□□□□□ -1.4
VTI1Q04338 GEP5YLR091W 882 nt6.29□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms