Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 tG(GCC)BtG(GCC)B 71 nt7.06□□□□□ -1.28
UBP3Q01477 SUF16tG(GCC)C 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)D1tG(GCC)D1 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)D2tG(GCC)D2 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)EtG(GCC)E 71 nt7.06□□□□□ -1.28
UBP3Q01477 SUF20tG(GCC)F1 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)F2tG(GCC)F2 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)G1tG(GCC)G1 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)G2tG(GCC)G2 71 nt7.06□□□□□ -1.28
UBP3Q01477 GTT3YEL017W 1014 nt7.06□□□□□ -1.28 RIP-Chip
UBP3Q01477 tG(GCC)J1tG(GCC)J1 71 nt7.06□□□□□ -1.28
UBP3Q01477 SUF23tG(GCC)J2 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)MtG(GCC)M 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)O1tG(GCC)O1 71 nt7.06□□□□□ -1.28
UBP3Q01477 SUF17tG(GCC)O2 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)P1tG(GCC)P1 71 nt7.06□□□□□ -1.28
UBP3Q01477 tG(GCC)P2tG(GCC)P2 71 nt7.06□□□□□ -1.28
UBP3Q01477 YKR104WYKR104W 921 nt7.06□□□□□ -1.28
UBP3Q01477 RRN10YBL025W 438 nt7.06□□□□□ -1.28
UBP3Q01477 RNH1YMR234W 1047 nt7.06□□□□□ -1.28
UBP3Q01477 YOL035CYOL035C 303 nt7.06□□□□□ -1.28
UBP3Q01477 ILV6YCL009C 930 nt7.06□□□□□ -1.28
UBP3Q01477 RIX7YLL034C 2514 nt7.06□□□□□ -1.28
UBP3Q01477 VMS1YDR049W 1899 nt7.05□□□□□ -1.28
UBP3Q01477 RSP5YER125W 2430 nt7.05□□□□□ -1.28 RIP-Chip
UBP3Q01477 IMG2YCR071C 441 nt7.05□□□□□ -1.28
UBP3Q01477 YEL028WYEL028W 462 nt7.05□□□□□ -1.28
UBP3Q01477 FSH1YHR049W 732 nt7.05□□□□□ -1.28
UBP3Q01477 DYS1YHR068W 1164 nt7.05□□□□□ -1.28
UBP3Q01477 YIL029W-AYIL029W-A 372 nt7.05□□□□□ -1.28
UBP3Q01477 OSW5YMR148W 447 nt7.05□□□□□ -1.28
UBP3Q01477 TAF9YMR236W 474 nt7.05□□□□□ -1.28
UBP3Q01477 SNN1YNL086W 309 nt7.05□□□□□ -1.28
UBP3Q01477 TOS6YNL300W 309 nt7.05□□□□□ -1.28
UBP3Q01477 ATG32YIL146C 1590 nt7.04□□□□□ -1.28
UBP3Q01477 YLR198CYLR198C 360 nt7.04□□□□□ -1.28
UBP3Q01477 RPL5YPL131W 894 nt7.04□□□□□ -1.28
UBP3Q01477 VRP1YLR337C 2454 nt7.03□□□□□ -1.28
UBP3Q01477 snR57snR57 88 nt7.03□□□□□ -1.28
UBP3Q01477 MRPS18YNL306W 654 nt7.03□□□□□ -1.28
UBP3Q01477 YPL014WYPL014W 1146 nt7.03□□□□□ -1.28 RIP-Chip
UBP3Q01477 TKL2YBR117C 2046 nt7.03□□□□□ -1.28
UBP3Q01477 URA7YBL039C 1740 nt7.02□□□□□ -1.29 RIP-Chip
UBP3Q01477 RMD5YDR255C 1266 nt7.02□□□□□ -1.29
UBP3Q01477 YGR283CYGR283C 1026 nt7.02□□□□□ -1.29
UBP3Q01477 YHR054CYHR054C 1065 nt7.02□□□□□ -1.29 RIP-Chip
UBP3Q01477 YHR218W-AYHR218W-A 318 nt7.02□□□□□ -1.29
UBP3Q01477 YBL112CYBL112C 318 nt7.02□□□□□ -1.29
UBP3Q01477 COX10YPL172C 1389 nt7.02□□□□□ -1.29
UBP3Q01477 YLH47YPR125W 1365 nt7.02□□□□□ -1.29
UBP3Q01477 HXT17YNR072W 1695 nt7.02□□□□□ -1.29
UBP3Q01477 GPD2YOL059W 1323 nt7.01□□□□□ -1.29 RIP-Chip
UBP3Q01477 EMW1YNL313C 2715 nt7.01□□□□□ -1.29
UBP3Q01477 CRP1YHR146W 1398 nt7.01□□□□□ -1.29
UBP3Q01477 HER2YMR293C 1395 nt7.01□□□□□ -1.29 RIP-Chip
UBP3Q01477 GCG1YER163C 699 nt7.01□□□□□ -1.29
UBP3Q01477 SOH1YGL127C 384 nt7.01□□□□□ -1.29
UBP3Q01477 ATG36YJL185C 882 nt7.01□□□□□ -1.29
UBP3Q01477 RFC4YOL094C 972 nt7.01□□□□□ -1.29
UBP3Q01477 HEM1YDR232W 1647 nt7.01□□□□□ -1.29 RIP-Chip
UBP3Q01477 RTG3YBL103C 1461 nt7□□□□□ -1.29
UBP3Q01477 YDL241WYDL241W 372 nt7□□□□□ -1.29
UBP3Q01477 RTN1YDR233C 888 nt7□□□□□ -1.29 RIP-Chip
UBP3Q01477 TRP4YDR354W 1143 nt7□□□□□ -1.29
UBP3Q01477 YDR541CYDR541C 1035 nt7□□□□□ -1.29 RIP-Chip
UBP3Q01477 YGR066CYGR066C 879 nt7□□□□□ -1.29
UBP3Q01477 YRB2YIL063C 984 nt7□□□□□ -1.29
UBP3Q01477 MIA40YKL195W 1212 nt7□□□□□ -1.29
UBP3Q01477 PPA2YMR267W 933 nt7□□□□□ -1.29 RIP-Chip
UBP3Q01477 PRM4YPL156C 855 nt7□□□□□ -1.29
UBP3Q01477 EDE1YBL047C 4146 nt6.99□□□□□ -1.29 RIP-Chip
UBP3Q01477 SLD2YKL108W 1362 nt6.99□□□□□ -1.29
UBP3Q01477 PMP3YDR276C 168 nt6.99□□□□□ -1.29 RIP-Chip
UBP3Q01477 YGL188CYGL188C 174 nt6.99□□□□□ -1.29
UBP3Q01477 YHR213W-BYHR213W-B 300 nt6.99□□□□□ -1.29
UBP3Q01477 ERP2YAL007C 648 nt6.99□□□□□ -1.29 RIP-Chip
UBP3Q01477 YJR146WYJR146W 354 nt6.99□□□□□ -1.29
UBP3Q01477 YKL153WYKL153W 510 nt6.99□□□□□ -1.29
UBP3Q01477 GCN3YKR026C 918 nt6.99□□□□□ -1.29
UBP3Q01477 YKR045CYKR045C 552 nt6.99□□□□□ -1.29
UBP3Q01477 YAR064WYAR064W 300 nt6.99□□□□□ -1.29
UBP3Q01477 CUE4YML101C 354 nt6.99□□□□□ -1.29
UBP3Q01477 UBS1YBR165W 834 nt6.99□□□□□ -1.29
UBP3Q01477 YHK8YHR048W 1545 nt6.99□□□□□ -1.29
UBP3Q01477 ERG8YMR220W 1356 nt6.98□□□□□ -1.29
UBP3Q01477 DHH1YDL160C 1521 nt6.98□□□□□ -1.29
UBP3Q01477 YDR415CYDR415C 1125 nt6.98□□□□□ -1.29
UBP3Q01477 YPT1YFL038C 621 nt6.98□□□□□ -1.29
UBP3Q01477 AIM20YIL158W 615 nt6.98□□□□□ -1.29
UBP3Q01477 YJR107WYJR107W 987 nt6.98□□□□□ -1.29
UBP3Q01477 LIP2YLR239C 987 nt6.98□□□□□ -1.29
UBP3Q01477 YMR135W-AYMR135W-A 534 nt6.98□□□□□ -1.29
UBP3Q01477 YOL038C-AYOL038C-A 96 nt6.98□□□□□ -1.29
UBP3Q01477 CTF18YMR078C 2226 nt6.98□□□□□ -1.29
UBP3Q01477 CCT8YJL008C 1707 nt6.98□□□□□ -1.29
UBP3Q01477 HIS1YER055C 894 nt6.97□□□□□ -1.29
UBP3Q01477 OM45YIL136W 1182 nt6.97□□□□□ -1.29
UBP3Q01477 MHT1YLL062C 975 nt6.97□□□□□ -1.29 RIP-Chip
UBP3Q01477 VTA1YLR181C 993 nt6.97□□□□□ -1.29
UBP3Q01477 ERV41YML067C 1059 nt6.97□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms