Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 HIR1YBL008W 2523 nt6.16□□□□□ -1.42
YNL040WP53960 COX20YDR231C 618 nt6.15□□□□□ -1.42
YNL040WP53960 ADE12YNL220W 1302 nt6.15□□□□□ -1.43
YNL040WP53960 SUP2tY(GUA)D 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP11tY(GUA)F1 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP6tY(GUA)F2 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP7tY(GUA)J1 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP4tY(GUA)J2 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP5tY(GUA)M1 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP8tY(GUA)M2 75 nt6.14□□□□□ -1.43
YNL040WP53960 SUP3tY(GUA)O 75 nt6.14□□□□□ -1.43
YNL040WP53960 YNR040WYNR040W 771 nt6.14□□□□□ -1.43
YNL040WP53960 GUA1YMR217W 1578 nt6.14□□□□□ -1.43
YNL040WP53960 RPL10YLR075W 666 nt6.13□□□□□ -1.43
YNL040WP53960 XBP1YIL101C 1944 nt6.12□□□□□ -1.43
YNL040WP53960 PRI2YKL045W 1587 nt6.12□□□□□ -1.43
YNL040WP53960 TAL1YLR354C 1008 nt6.12□□□□□ -1.43
YNL040WP53960 YOR200WYOR200W 399 nt6.12□□□□□ -1.43
YNL040WP53960 MNS1YJR131W 1650 nt6.11□□□□□ -1.43
YNL040WP53960 ALD6YPL061W 1503 nt6.11□□□□□ -1.43
YNL040WP53960 ECM19YLR390W 339 nt6.11□□□□□ -1.43
YNL040WP53960 ENV7YPL236C 1095 nt6.11□□□□□ -1.43
YNL040WP53960 RAD3YER171W 2337 nt6.1□□□□□ -1.43
YNL040WP53960 HAL5YJL165C 2568 nt6.1□□□□□ -1.43
YNL040WP53960 SUP19tS(UGA)E 82 nt6.1□□□□□ -1.43
YNL040WP53960 SUP17tS(UGA)I 82 nt6.1□□□□□ -1.43
YNL040WP53960 SUP16tS(UGA)P 82 nt6.1□□□□□ -1.43
YNL040WP53960 UIP4YPL186C 915 nt6.1□□□□□ -1.43
YNL040WP53960 MRPS5YBR251W 924 nt6.1□□□□□ -1.43
YNL040WP53960 RGT2YDL138W 2292 nt6.1□□□□□ -1.43
YNL040WP53960 SIT4YDL047W 936 nt6.09□□□□□ -1.43
YNL040WP53960 THI4YGR144W 981 nt6.09□□□□□ -1.43
YNL040WP53960 YJU3YKL094W 942 nt6.09□□□□□ -1.43
YNL040WP53960 CCP1YKR066C 1086 nt6.09□□□□□ -1.43
YNL040WP53960 PXL1YKR090W 2121 nt6.09□□□□□ -1.43
YNL040WP53960 UBC11YOR339C 471 nt6.09□□□□□ -1.43
YNL040WP53960 GIT1YCR098C 1557 nt6.09□□□□□ -1.43
YNL040WP53960 PYC1YGL062W 3537 nt6.09□□□□□ -1.43
YNL040WP53960 HXK2YGL253W 1461 nt6.09□□□□□ -1.44
YNL040WP53960 YDL144CYDL144C 1071 nt6.08□□□□□ -1.44
YNL040WP53960 YML012C-AYML012C-A 378 nt6.08□□□□□ -1.44
YNL040WP53960 ALT2YDR111C 1524 nt6.07□□□□□ -1.44
YNL040WP53960 APE3YBR286W 1614 nt6.07□□□□□ -1.44
YNL040WP53960 YKR023WYKR023W 1593 nt6.06□□□□□ -1.44
YNL040WP53960 BZZ1YHR114W 1902 nt6.06□□□□□ -1.44
YNL040WP53960 YDR109CYDR109C 2148 nt6.06□□□□□ -1.44
YNL040WP53960 HAP2YGL237C 798 nt6.06□□□□□ -1.44
YNL040WP53960 DJP1YIR004W 1299 nt6.06□□□□□ -1.44
YNL040WP53960 TIF2YJL138C 1188 nt6.06□□□□□ -1.44
YNL040WP53960 TIF1YKR059W 1188 nt6.06□□□□□ -1.44
YNL040WP53960 COR1YBL045C 1374 nt6.06□□□□□ -1.44
YNL040WP53960 ERC1YHR032W 1746 nt6.05□□□□□ -1.44
YNL040WP53960 YDL022C-AYDL022C-A 249 nt6.05□□□□□ -1.44
YNL040WP53960 RME1YGR044C 903 nt6.05□□□□□ -1.44
YNL040WP53960 YNL017CYNL017C 339 nt6.05□□□□□ -1.44
YNL040WP53960 YOL131WYOL131W 327 nt6.05□□□□□ -1.44
YNL040WP53960 RPN7YPR108W 1290 nt6.05□□□□□ -1.44
YNL040WP53960 MCM6YGL201C 3054 nt6.05□□□□□ -1.44
YNL040WP53960 UGX2YDL169C 672 nt6.04□□□□□ -1.44
YNL040WP53960 PRS2YER099C 957 nt6.04□□□□□ -1.44
YNL040WP53960 ATG12YBR217W 561 nt6.04□□□□□ -1.44
YNL040WP53960 YEH1YLL012W 1722 nt6.04□□□□□ -1.44
YNL040WP53960 SLX5YDL013W 1860 nt6.04□□□□□ -1.44
YNL040WP53960 YPK2YMR104C 2034 nt6.04□□□□□ -1.44
YNL040WP53960 VPS70YJR126C 2436 nt6.04□□□□□ -1.44
YNL040WP53960 SFB3YHR098C 2790 nt6.03□□□□□ -1.44
YNL040WP53960 HSP78YDR258C 2436 nt6.03□□□□□ -1.44
YNL040WP53960 DFM1YDR411C 1026 nt6.03□□□□□ -1.44
YNL040WP53960 IRC7YFR055W 1023 nt6.03□□□□□ -1.44
YNL040WP53960 YLR126CYLR126C 756 nt6.03□□□□□ -1.44
YNL040WP53960 YBR144CYBR144C 315 nt6.03□□□□□ -1.44
YNL040WP53960 SGV1YPR161C 1974 nt6.03□□□□□ -1.44
YNL040WP53960 GPA2YER020W 1350 nt6.03□□□□□ -1.44
YNL040WP53960 CHO1YER026C 831 nt6.02□□□□□ -1.45
YNL040WP53960 YER148W-AYER148W-A 579 nt6.02□□□□□ -1.45
YNL040WP53960 RPS2YGL123W 765 nt6.02□□□□□ -1.45
YNL040WP53960 YPL102CYPL102C 303 nt6.02□□□□□ -1.45
YNL040WP53960 DIA3YDL024C 1407 nt6.01□□□□□ -1.45
YNL040WP53960 EPS1YIL005W 2106 nt6.01□□□□□ -1.45
YNL040WP53960 LYS12YIL094C 1116 nt6.01□□□□□ -1.45
YNL040WP53960 SPO7YAL009W 780 nt6.01□□□□□ -1.45
YNL040WP53960 AAD15YOL165C 432 nt6.01□□□□□ -1.45
YNL040WP53960 TNA1YGR260W 1605 nt6□□□□□ -1.45
YNL040WP53960 ATP1YBL099W 1638 nt6□□□□□ -1.45
YNL040WP53960 VRP1YLR337C 2454 nt6□□□□□ -1.45
YNL040WP53960 RPS9AYPL081W 594 nt6□□□□□ -1.45
YNL040WP53960 ISN1YOR155C 1353 nt6□□□□□ -1.45
YNL040WP53960 YER186CYER186C 921 nt5.99□□□□□ -1.45
YNL040WP53960 NPA3YJR072C 1158 nt5.99□□□□□ -1.45
YNL040WP53960 SEN34YAR008W 828 nt5.99□□□□□ -1.45
YNL040WP53960 STM1YLR150W 822 nt5.99□□□□□ -1.45
YNL040WP53960 SCO2YBR024W 906 nt5.99□□□□□ -1.45
YNL040WP53960 MRK1YDL079C 1506 nt5.99□□□□□ -1.45
YNL040WP53960 YML082WYML082W 1950 nt5.98□□□□□ -1.45
YNL040WP53960 SEC20YDR498C 1152 nt5.98□□□□□ -1.45
YNL040WP53960 HSP150YJL159W 1242 nt5.98□□□□□ -1.45
YNL040WP53960 DPH5YLR172C 903 nt5.98□□□□□ -1.45
YNL040WP53960 KSS1YGR040W 1107 nt5.97□□□□□ -1.45
YNL040WP53960 ASK1YKL052C 879 nt5.97□□□□□ -1.45
YNL040WP53960 SNN1YNL086W 309 nt5.97□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms