Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 ALD6YPL061W 1503 nt5.29□□□□□ -1.56
UFD1P53044 VTH1YIL173W 4650 nt5.29□□□□□ -1.56
UFD1P53044 VTH2YJL222W 4650 nt5.29□□□□□ -1.56
UFD1P53044 MPC2YHR162W 390 nt5.29□□□□□ -1.56
UFD1P53044 GLN1YPR035W 1113 nt5.29□□□□□ -1.56
UFD1P53044 YFL042CYFL042C 2025 nt5.29□□□□□ -1.56
UFD1P53044 RNH201YNL072W 924 nt5.28□□□□□ -1.56
UFD1P53044 SUE1YPR151C 621 nt5.28□□□□□ -1.56
UFD1P53044 YPR196WYPR196W 1413 nt5.28□□□□□ -1.56
UFD1P53044 YLL067CYLL067C 3618 nt5.27□□□□□ -1.57
UFD1P53044 YMR119W-AYMR119W-A 375 nt5.27□□□□□ -1.57
UFD1P53044 IDP3YNL009W 1263 nt5.27□□□□□ -1.57
UFD1P53044 RVB2YPL235W 1416 nt5.27□□□□□ -1.57
UFD1P53044 MAL11YGR289C 1851 nt5.26□□□□□ -1.57
UFD1P53044 EIS1YMR031C 2532 nt5.26□□□□□ -1.57
UFD1P53044 VPS24YKL041W 675 nt5.26□□□□□ -1.57
UFD1P53044 IMD1YAR073W 1212 nt5.26□□□□□ -1.57
UFD1P53044 FSF1YOR271C 984 nt5.26□□□□□ -1.57
UFD1P53044 WHI2YOR043W 1461 nt5.26□□□□□ -1.57
UFD1P53044 CRF1YDR223W 1404 nt5.25□□□□□ -1.57
UFD1P53044 RPT3YDR394W 1287 nt5.25□□□□□ -1.57
UFD1P53044 ECM14YHR132C 1293 nt5.25□□□□□ -1.57
UFD1P53044 FAF1YIL019W 1041 nt5.25□□□□□ -1.57
UFD1P53044 GUD1YDL238C 1470 nt5.25□□□□□ -1.57
UFD1P53044 YEL075W-AYEL075W-A 612 nt5.24□□□□□ -1.57
UFD1P53044 COG1YGL223C 1254 nt5.24□□□□□ -1.57
UFD1P53044 MSP1YGR028W 1089 nt5.24□□□□□ -1.57
UFD1P53044 RPE1YJL121C 717 nt5.24□□□□□ -1.57
UFD1P53044 YLR463CYLR463C 552 nt5.24□□□□□ -1.57
UFD1P53044 RDL2YOR286W 450 nt5.24□□□□□ -1.57
UFD1P53044 NHP6BYBR089C-A 300 nt5.24□□□□□ -1.57
UFD1P53044 KEX2YNL238W 2445 nt5.23□□□□□ -1.57
UFD1P53044 YFR052C-AYFR052C-A 306 nt5.23□□□□□ -1.57
UFD1P53044 YMR295CYMR295C 594 nt5.23□□□□□ -1.57
UFD1P53044 MRPL10YNL284C 969 nt5.23□□□□□ -1.57
UFD1P53044 VMA4YOR332W 702 nt5.23□□□□□ -1.57
UFD1P53044 TAH18YPR048W 1872 nt5.23□□□□□ -1.57
UFD1P53044 TAX4YJL083W 1815 nt5.23□□□□□ -1.57
UFD1P53044 ERG1YGR175C 1491 nt5.22□□□□□ -1.57
UFD1P53044 POX1YGL205W 2247 nt5.22□□□□□ -1.57
UFD1P53044 CWC21YDR482C 408 nt5.22□□□□□ -1.57
UFD1P53044 BCY1YIL033C 1251 nt5.22□□□□□ -1.57
UFD1P53044 TSR3YOR006C 942 nt5.22□□□□□ -1.57
UFD1P53044 RRS1YOR294W 612 nt5.22□□□□□ -1.57
UFD1P53044 CLP1YOR250C 1338 nt5.22□□□□□ -1.57
UFD1P53044 KKQ8YKL168C 2175 nt5.21□□□□□ -1.58
UFD1P53044 SFB3YHR098C 2790 nt5.21□□□□□ -1.58
UFD1P53044 YET3YDL072C 612 nt5.21□□□□□ -1.58
UFD1P53044 MDH3YDL078C 1032 nt5.21□□□□□ -1.58
UFD1P53044 YLR157W-EYLR157W-E 165 nt5.21□□□□□ -1.58
UFD1P53044 RPN7YPR108W 1290 nt5.21□□□□□ -1.58
UFD1P53044 TNA1YGR260W 1605 nt5.21□□□□□ -1.58
UFD1P53044 ACC1YNR016C 6702 nt5.2□□□□□ -1.58
UFD1P53044 JIP4YDR475C 2631 nt5.2□□□□□ -1.58
UFD1P53044 MAK31YCR020C-A 267 nt5.2□□□□□ -1.58
UFD1P53044 CDC34YDR054C 888 nt5.2□□□□□ -1.58
UFD1P53044 YEL068CYEL068C 333 nt5.2□□□□□ -1.58
UFD1P53044 SHO1YER118C 1104 nt5.2□□□□□ -1.58
UFD1P53044 tR(ACG)DtR(ACG)D 73 nt5.2□□□□□ -1.58
UFD1P53044 tR(ACG)EtR(ACG)E 73 nt5.2□□□□□ -1.58
UFD1P53044 tR(ACG)KtR(ACG)K 73 nt5.2□□□□□ -1.58
UFD1P53044 tR(ACG)LtR(ACG)L 73 nt5.2□□□□□ -1.58
UFD1P53044 tR(ACG)OtR(ACG)O 73 nt5.2□□□□□ -1.58
UFD1P53044 SUP2tY(GUA)D 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP11tY(GUA)F1 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP6tY(GUA)F2 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP7tY(GUA)J1 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP4tY(GUA)J2 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP5tY(GUA)M1 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP8tY(GUA)M2 75 nt5.2□□□□□ -1.58
UFD1P53044 SUP3tY(GUA)O 75 nt5.2□□□□□ -1.58
UFD1P53044 LDS1YAL018C 978 nt5.2□□□□□ -1.58
UFD1P53044 YML018CYML018C 1182 nt5.2□□□□□ -1.58
UFD1P53044 TSA1YML028W 591 nt5.2□□□□□ -1.58
UFD1P53044 HST3YOR025W 1344 nt5.2□□□□□ -1.58
UFD1P53044 CIT3YPR001W 1461 nt5.2□□□□□ -1.58
UFD1P53044 RPL10YLR075W 666 nt5.19□□□□□ -1.58
UFD1P53044 NHA1YLR138W 2958 nt5.19□□□□□ -1.58
UFD1P53044 CLB1YGR108W 1416 nt5.19□□□□□ -1.58
UFD1P53044 MDM31YHR194W 1740 nt5.19□□□□□ -1.58
UFD1P53044 FRS2YFL022C 1512 nt5.18□□□□□ -1.58
UFD1P53044 SNU71YGR013W 1863 nt5.18□□□□□ -1.58
UFD1P53044 MAK32YCR019W 1092 nt5.18□□□□□ -1.58
UFD1P53044 HVG1YER039C 750 nt5.18□□□□□ -1.58
UFD1P53044 RPN11YFR004W 921 nt5.18□□□□□ -1.58
UFD1P53044 PHO86YJL117W 936 nt5.18□□□□□ -1.58
UFD1P53044 YHM2YMR241W 945 nt5.18□□□□□ -1.58
UFD1P53044 YNR040WYNR040W 771 nt5.18□□□□□ -1.58
UFD1P53044 MRPS16YPL013C 366 nt5.18□□□□□ -1.58
UFD1P53044 YPR114WYPR114W 948 nt5.18□□□□□ -1.58
UFD1P53044 UBA1YKL210W 3075 nt5.18□□□□□ -1.58
UFD1P53044 GAT1YFL021W 1533 nt5.18□□□□□ -1.58
UFD1P53044 YDR396WYDR396W 501 nt5.17□□□□□ -1.58
UFD1P53044 YGR176WYGR176W 348 nt5.17□□□□□ -1.58
UFD1P53044 RHO3YIL118W 696 nt5.17□□□□□ -1.58
UFD1P53044 YOL131WYOL131W 327 nt5.17□□□□□ -1.58
UFD1P53044 snR32snR32 188 nt5.17□□□□□ -1.58
UFD1P53044 YAP1801YHR161C 1914 nt5.17□□□□□ -1.58
UFD1P53044 SSK1YLR006C 2139 nt5.17□□□□□ -1.58
UFD1P53044 UTP4YDR324C 2331 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms